Research Experience for Undergraduates (REU) : Department of Physics and Astronomy : University of Rochester

Research Experience for Undergraduates (REU)

Undergraduate Research in Physics and Astronomy at the University of Rochester (REU) 1994-Dec 2011 (320 publications). Publications in Journals and Conference Proceedings by REU Undergraduates (or other undergraduates supervised by Rochester Faculty) since 1994.

Quantum Optics and Laser Physics Experiment (Journal articles and Conference Proceedings 1994-2008

Chemical structure and the mixed mobile ion effect in silver-for-sodium ion exchange in silicate glasses; J.M. Inman, S.N. Houde-Walter, B.L. McIntyre, Z.M. Liao, R.S. Parker, V. Simmons, Journal of Non-Crystalline Solids, 1994
Brian Taylor, Striations in the Positive Column of Glow Discharges,(N. P.Bigelow). Proceedings of 8th NCUR Conference, Western Michigan Univ. Kalamazoo MI (1994)
Mark Su, Striations in the Positive Column of Glow Discharges, (N. P.Bigelow). Proceedings of 8th NCUR Conference, Western Michigan Univ. Kalamazoo MI (1994)
The Atom Valve, S.H.Lee (N. Bigelow), Proc. of the 10th NCUR. Conference, Univ. of North Carolina (1996), pp.1328-1332.
The Neutral Atom Valve, H. Pu, P. Rudy, R. Enjeesman, S.H.Lee, , N. Bigelow, Proc. 1996 quantum Electronics and Laser Spectroscopy Conf., Technical Digest Series of the OAS, 10:89 (1996)
Dynamic Confinement of Ultra-Cold Ato,s: Demonstration of RPDiO Trap (Rotating off-resonanct Dipole Optical Trap), P. Rudy, R. Enjisman, A. Rahman and S. Lee. in Proceedings of the 12th Multidisciplinary Laser Science Conference, Rochester, NY 1996.
The Neutral Atom Valve, H. Pu, S.H.Lee, P. Rudy, N. Bigelow, Proc.Wokshop on Atom Optics and Interferometry, Elba, Italy (1996)..
The Atom Valve, S.H.Lee (N. Bigelow), Proc. of the 10th NCUR. Conference, Univ. of North Carolina (1996), pp.1328-1332.
Methods of studying magnetic circular dichroism in Er(+3) doped aluminosilicate glass, D. Pulios, D. Johnson, Caitlin Dickinson, J. Spoonhauer, N. Bigelow. proceedings of the Conferenc on Photorefractive Effects in Glass, Willamsburg, VA (1997).
The Neutral Atom Valve, H. Pu, S.H.Lee, P. Rudy, N. Bigelow, Rev.Sci. Inst. (published 1999)
Characterization of the RODiO Trap (Rotating Off-resonant Dipole Optical Trap). P. Rudy, R. Ejnisman, A. Rahman, S. Lee, N. P. Bigelow. published in Proceedings of the International Conference Interdisciplinary of Quantum Electronics, Baltimore. 1997.
Laser System for the TTF Photoinjector at Fermilab , A. R. Fry, M. J. Fitch, A. C. Melissinos, N. P. Bigelow, B. D. Taylor and F. A. Nezrick, in Proceedings of the IEEE Particle Accelerator Conference (1997)
Iaconis C, Mukamel E, Walmsley IA Temporal heterodyne detector for multitemporal mode quantum state measurement J OPT B-QUANTUM S O 2 (4): 510-516 AUG 2000
P. Rudy, R. Ejnisman, A. Rahman, S. Lee, N. P. Bigelow, An all optical dynamical dark trap for neutral atoms,, Optics Express 8, 159 (2001)
Dye-doped cholesteric-liquid-crystal room-temperature single-photon source Lukishova SG, Schmid AW, Supranowitz CM, et al. JOURNAL OF MODERN OPTICS Volume: 51 Issue: 9-10 Pages: 1535-1547 Published: JUN-JUL 2004
Bell Inequalities for particles of arbitrary spin in fixed analyzer, Ronen Mukamel and John C. Howell Phys. Rev. A 70, 054302 (2004). 10.1103/PhysRevA.70.054302
Single-photon source for quantum information based on single dye molecule fluorescence in liquid crystal host Lukishova SG, Knox RP, Freivald P, et al. MOLECULAR CRYSTALS AND LIQUID CRYSTALS Volume: 454 Pages: 1-14 Published: 2006
Observation of Backward Pulse Propagation Through a Medium with a Negative Group Velocity, G. M. Gehring, A. Schweinsberg, C. Barsi, N. Kostinski, R. W. Boyd, Science 312, 985 2006.
REPRESENTATION OF RAYS AND WAVES IN CONVEX CAVITIES IN TERMS OF ANGLE AND IMPACT PARAMETER. Herrera, Oscar, Proceedings of NCUR 2007 Conference. http://www.dominican.edu/query/ncur/display_ncur.php?id=2687
Room temperature source of single photons of definite polarization Lukishova SG, Schmid AW, Knox R, et al. JOURNAL OF MODERN OPTICS Volume: 54 Issue: 2-3 Pages: 417-429 Published: JAN 20 2007
“Quantum optics teaching laboratory”, Svetlana G. Lukishova, Anand K. Jha, Nickolaos Savidis, Sean White, Luke Bissell, Laura Elgin, Carlos R. Stroud, Jr., Proceedings of 9th Rochester Conference on Coherence and Quantum Optics CQO9, June 10-13, 2007, Rochester, NY, paper JWC8.
“Room-temperature single photon sources with fluorescent emitters in liquid crystal hosts”,Svetlana G. Lukishova, Luke Bissell, Simon K.H. Wei, Ansgar W. Schmid, Zhimin Shi, Heedeuk Shin, Russell Knox, Patrick Freivald, Robert W. Boyd, Carlos R. Stroud, Jr., Shaw H. Chen, Kenneth Marshall, Proceedings of the International Conference on Quantum Information ICQI, June 13-15, 2007, Rochester NY, Paper IThE3.
Reducting pulse distortion in fast-light pulse propagation through an erbium-doped fiber amplifier, H. Shin, A. Schweinsberg, G. Gehring, K. Schwertz, H.J. Chang, R.W. Boyd, Q-H. Park, and D.J. Gauthier, Opt. Lett. 32, 906 (2007).
Computer Simulations of the Electrodynamic Trapping of Polar Molecules, Derek Vigil, (N. Bigelow), Abtract at the DLS of APS meeting, October 6th-8th, 2006 in Rochester, NY
Trapping cold polar molecules on chips, N. Bigelow, Derek Vigil, M. Tscherneck, J. Kleinert, C. Haimberger, , Nucl Phys. A 790, 762 (2007). 10.1016/j.nuclphysa.2007.03.119, 2007NuPhA.790..762B
“Single photon source on demand based on single-colloidal-quantum-dot fluorescence in chiral photonic bandgap liquid crystal hosts”, L.J. Bissell, Z. Shi, H. Shin, S.G. Lukishova,S.M. White, M.A. Hahn , R.W. Boyd, C.R. Stroud, Jr., T.D. Krauss, Technical Digest, QELS 2007, 6-11 May 2007, Baltimore, MD, paper JMC4.
“Single-colloidal-quantum-dot fluorescence antibunching in chiral photonic bandgap hosts at room temperature”, L.J. Bissell, Z. Shi, H. Shin, S.G. Lukishova, S.M. White, M.A. Hahn,R.W. Boyd, C.R. Stroud, Jr., T.D. Krauss, Technical Digest, IQEC 2007, 17-22 June 2007, Munich, Germany, paper IC-6-TUE.
“Organic photonic bandgap microcavities doped with semiconductor nanocrystals for room-temperature single photon sources on demand”, S.G. Lukishova, L.J. Bissell, V.M. Menon, N. Valappil, M.A. Hahn, C.M. Evans, B. Zimmerman, T.D. Krauss, C.R. Stroud, Jr., R.W. Boyd, paper submitted in J.Modern Optics, 2008.
Experimental Observance of Single Photon Fluorescence and Emittance, and Photon Antibunching". (to be published) Dr. Lukishova, Dr. Carlos Stroud, Dr. Robert Boyd, Luke Bissell, Brandon Zimmerman, Brandon Zimmerman, Carlos Stroud to be submitted to American Journal of Physics i June 2008).
Josh Geller’s " Action, Camera, Light!", report on the Optical Society of America meeting, 2010
published on the website for the Student Perspectives on Physics Meetings of the American Physical Society.

Quantum Optics and Laser Physics Theory (Journal articles and Conference Proceedings 1994-

Dressed-field pulses in an absorbing medium, J. H. Eberly, M. L. Pons and H. R. Haq; Phys. Rev. Lett. 72, 56 (1994).
The Transition between Adiabatic and Non-Adiabatic Dynamic Behavior in a Simple Quantum System, R. Maruyama (J. H. Eberly), J. Undergrad Res. Phys., Vol. 13, 56 (1995).
Adiabatic Population Transfer in a Three Level Atom, James V. Ruffo (J. H. Eberly), J. Undergrad. Res. Phys. Vol. 15, 25 ( 1996).
Counter-intuitive Excitation in a Three Level System with Detuned Pulses, James V. Ruffo (J. H. Eberly), J. Undergrad. Res. Phys. Vol. 15, 55 (1997).
Two Laser Excitation of a Three State Atom, Emek Yesilada (J. H. Eberly), J. Undergrad. Res. Phys. Vol. 17, 2 (1998).
Perfect Following in the Adiabatic Limit, Denise Sawicki and J. H. Eberly Opt Exp. 4, 21 7( 1999).
Energy States of a Gaussian Wavepacket in an Infinite Square Well, by David Etlinger (J. H. Eberly), J. Undergrad Res. Phys., Vol. 18, 45 (2002)
The effect of the jet-stream on the intensity of laser beams propagating along slanted paths in the upper layers of the turbulent atmosphere , : Korotkova Olga;Farwell Nathan; Mahalov Alex, WAVES IN RANDOM AND COMPLEX MEDIA Volume: 19 Issue: 4 Pages: 692-702 DOI: 10.1080/17455030903127653 Published: 2009
Effect of oceanic turbulence on polarization of stochastic beams , Korotkova Olga;Farwell Nathan , OPTICS COMMUNICATIONS Volume: 284 Issue: 7 Pages: 1740-1746 DOI: 10.1016/j.optcom.2010.12.024 Published: APR 1 2011
Spectral changes in stochastic light beams propagating in turbulent ocean , Shchepakina E.; Farwell N.; Korotkova O.
APPLIED PHYSICS B-LASERS AND OPTICS Volume: 105 Issue: 2 Pages: 415-420 DOI:10.1007/s00340-011-4626-9 Published: NOV 2011

Theory: Particle, Nuclear and Mathematical Physics (Journal articles and Conf. Proceedings 1994-2008

Negative Binomial Parameters and the Two-Mechanism Model, I. Golyak and S. Galayda, Z. Phys. (Particles and Fields). C70: 227 (1996).
Intermittency Regions at High Energies, Isay Golyak and T. Andre, Z. Phys. C (Particles and Fields) C74, 275 (1997).
Soft Gluon Radiation in Top Events: Effect of Hadronic W Decays” B. Masuda, L. H. Orr, and W. J. Stirling, Phys. Rev. D. 54, (1996), 4453.
Gluon Radiation in Top Quark Mass Reconstruction: Effect of Hadronic W Decays, L. H. Orr, T. Andre, in Proceedings of XXIX International Conference on High Energy Physics, Vancouver, Canada, July 1998 (page 1103).
Top quark physics. By M. Beneke, et al., In *Geneva 1999, Standard model physics (and more) at the LHC* 419-52. [hep-ph/0003033].
Direct measurement of the top quark charge at hadron colliders. By U. Baur, M. Buice,Lynne H. Orr. Phys.Rev.D64:094019,2001. [hep-ph/0106341]
A model of interacting partons for hadronic structure functions, Krishnaswami, G. S.; Rajeev, S. G. Physics Letters B, Volume 441, Issue 1-4, p. 429-436. (1998( 1998PhLB..441..429K
The x-dependence of Parton Distributions Compared with Neutrino Data ,Krishnaswami, G. S.; Rajeev, S. G. 1999hep.ph....8279K
The Anti-quark Distribution Function of the Baryon John, V.; Krishnaswami, G. S.;Rajeev, S. G 1999hep.ph....8285J
Casimir Energy of a Spherical Shell, M. E. Bowers, C. R. Hagen, Phys. Rev. D59, 0025007 (1999).
An interacting parton model for quark and anti-quark distributions in the baryon, John, V.;Krishnaswami, G. S.; Rajeev, S. G.,Physics Letters B, Volume 487, Issue 1-2, p. 125-132. (2000) 2000PhLB..487..125J
Interacting quark model from bi-local soliton picture of baryon in two dimensions, John, Varghese; Krishnaswami, Govind S.; Rajeev, S. G. THEORETICAL HIGH ENERGY PHYSICS: MRST 2000. AIP Conference Proceedings, Volume 541, pp. 178-189 (2000) 2000AIPC..541..178J
Parton model from bi-local solitonic picture of the baryon in two-dimensions, John, V.;Krishnaswami, G. S.; Rajeev, S. G. Physics Letters B, Volume 492, Issue 1-2, p. 63-68. (2000) 2000PhLB..492...63J
Parton distributions from 1+1 QCD, John, Varghese; Krishnaswami, Govind S.; Rajeev, S. G., NTERSECTIONS OF PARTICLE AND NUCLEAR PHYSICS: 7th Conference. AIP Conference Proceedings, Volume 549, pp. 524-526 (2000) 2000AIPC..549..524J
Interacting Quark Model from Bi-local Soliton Picture of Baryon in Two Dimensions, John, V.;Krishnaswami, G. S.; Rajeev, S. G.Theoretical High Energy Physics, MRST 2000 (also AIPC 541). Conference held M ay 8-9, 2000, in Rochester, New York. AIP Conference Proceedings, Volume 541. Ed ited by C. R. Hagen. ISBN 1-56396-966-1. Published by the American Institute of Physics, Melville, New York, 2001, p.178 2001AIPC..541..178J
Variational principle for large N matrix models. By L. Akant, G.S. Krishnaswami, S.G. Rajeev. MRST 2001 (2001: London, Ont.) Theoretical high energy physics: MRST 2001, a tribute to Roger Migneron: London, Ontario, Canada, 15-18 May 2001/ editors, V. Elias, D.G.C. McKeon, V.A. Miransky. Melville, N.Y.: American Institute of Physics, 2001. AIP conference proceedings, v. 601., p.267 . 2001AIPC..601..267A
Entropy of operator valued random variables: A Variational principle for large N matrix models. By L. Akant, G.S. Krishnaswami, S.G. Rajeev, Int. J. Mod. Phys. A17:2413-2444, 2002 [hep-th/0111263] 2002IJMPA..17.2413A
The distribution of inverses modulo a prime in short intervals, Gonek SM, Krishnaswami GS, Sondhi VL, ACTA ARITH 102 (4): 315-322 2002
Large N Matrix Models and Noncommutative Fisher Information, Agarwal, A.; Akant, L.;Krishnaswami, G. S.; Rajeev, S. G. THEORETICAL PHYSICS: MRST 2002: A Tribute to George Leibbrandt. AIP Conference Proceedings, Volume 646, pp. 173-178 (2002). 2002AIPC..646..173A
Collective Potential for Large-N Hamiltonian Matrix Models and Free Fisher Information. Agarwal, A.; Akant, L.; Krishnaswami, G. S.; Rajeev, S. G. International Journal of Modern Physics A, Volume 18, Issue 06, pp. 917-937 (2003),10.1142/S0217751X03012230 2003IJMPA..18..917A
Decays of the Littlest Higgs Z(H) and the Onset of Strong Dynamics. John Boersma,Andrew Whitbeck (Rochester U.) . Published in Phys.Rev.D77:055012,2008.

Experiment: Particle Physics (Journal articles and Conf. Proceedings 1994-2008

CDF End Plug Hadron Calorimeter Upgrade: Design, Production and Quality Control Results,, K. Michaud (A. Bodek), proceedings of NCUR 9, National Conference of Undergraduate Research, 1995.
Quality Control Studies of Scintillating Tile-fiber Megatile Production for the CDF End Plug Upgrade Hadron Calorimeter, P. de Barbaro, K. Michaud, A. Bodek, et al. Proc. of Nucl. Science Symposium and Medical Imaging Conf., Norfolk, VA (1994). Also IEEE Conference Records, p. 569. (UR-1371)
CDF End Plug Hadron Calorimeter Upgrade: Design, Production and Quality Control Results, P. de Barbaro, A. Bodek, K. Michaud, et al. IEEE Trans. Nucl. Sci. Vol. 42:510 No. 4 (Aug., 1995). (UR-1398)
Comparison of Data and Theory of the Interaction of Electrons Hadrons and Muons in Scintillation Sampling Calorimeters, K. Michaud (A. Bodek), Proceedgins of NCUR 10, National Conference of Undergraduate Research, 1996.
A Study of the Interactions of Cosmic Ray Muons in the TeV Energy Range, A. Chikkatur (A. Bodek, P. Auchincloss); Proceedings of NCUR 10, National Conference of Undergraduate Research, 1996.
A Study of Acrylic Cerenkov Radiation Detectors, B. Porter, A. Bodek, et al., Abstract in Bulletin of The American Physial Society (1996); presented at the American Physial Society Meeting, Indianapolis, 1996.
A GEANT Simulation of the Response of a Copper-Scintillator Sampling Calorimeter to Electrons and Hadrons, K. Michaud, A. Bodek, P. de Barbaro, H. Budd. Abstract in Bulletin of The American Physial Society (1996); presented at the American Physial SocietyMeeting, Indianapolis, 1996.
A. Study of the Interactions of Cosmic Ray Muons in the Tev Energy Range, A. Chikkatur, (A. Bodek, P. Auchincloss). Abstract in Bulletin of The American Physial Society (1996); presented at the American Physial Society Meeting, Indianapolis, 1996.
A. Study of High Energy Muons using the CCFR/NuTeV detector, L. Bugel, (A. Bodek, ). Abstract in Bulletin of The American Physial Society (1996); American Physial SocietyMeeting, Indianapolis, 1996.
Troy Andre, “Gluon radiation in top quark production and decay with hadronic W decays” (with Lynne Orr). Presented at the April, 1997 American Physial Society Conference, Washington, DC.
Greg Veramendi, “The development of a monte carlo simulation for the track trigger processor at CDF” (with Paul Tipton). Proceedings of NCUR 97, Austin, Texas.
Non-Linearity in the Hadronic Response of the NuTeV Calorimeter, G. Krishnaswami, A. Bodek, Proceedings of NCUR 1999.
Calibration of the NuTeV Calorimeter, S. Avvakumov...D. Berlin, A. Bodek G. Krishnaswami, et . al.NuTeV collaboration, UR-1562 (Jan. 1999), published in proceedings of the 6th International Conference on Advanced Technology and Particle Physics, Villa Olmo, Italy, October~1998.
NuTeV through Thick and Thin, D. Harris, D. Berlin, A. Bodek, et al to be published in Proceedings of the Space and Baloon Based Calorimetry workshop, Texas (1999).
Studies of the response of the prototype CMS hadron calorimeter, including magnetic field effects, to pion, electron, and muon beams.Abramov VV, Acharya BS, Akchurin N, et al.
A Precision measurement of electroweak parameters in neutrino - nucleon scattering. By CCFR Collaboration Eur.Phys.J.C1:509-513,1998. [hep-ex/9701010
Tests of a calorimetric technique for measuring the energy of cosmic raymuons in the TeV energy range. By NuTeV/CCFR Collaboration Z.Phys.C74:279-290,1997.
Heavy quark production in neutrino deep inelastic scattering. By T. Adams, et al., In *Batavia 1998, Heavy quarks at fixed target* 198-20.Measurement of sin**2(Theta(W)) in nu N scattering at the Tevatron. By NuTeV Collaboration\In *Vancouver 1998, High energy physics, vol. 1* 555-55.
Searches for evidence of neutrino mass in the NuTeV experiment at Fermilab. By NuTeV Collaboration In *Vancouver 1998, High energy physics, vol. 1* 616-62.
Measurement of sin**2 theta-W from neutrino nucleon scattering at NuTeV. By NuTeV Collaboration [hep-ex/9806013] (Mar 1998) 12p.
Neutrino trident production from NuTeV. By NuTeV Collaboration In *Vancouver 1998, High energy physics, vol. 1* 631-63. [hep-ex/9811012]
Search for neutral heavy leptons in the NuTeV experiment at Fermilab. By NuTeV Collaboration In *Vancouver 1998, High energy physics, vol. 2* 1370-137. [hep-ex/9811036]
Performance of the NuTeV Fe - scintillator sampling calorimeter and implications for thin calorimeters. By CCFR/NuTeV CollaborationNucl.Phys.Proc.Suppl.78:232-237,1999. [hep-ex/0001047]
Measurement of sin**2 theta(W) in neutrino N scattering from NuTeV. By NuTeV Collaboration In *Cape Town 1999, Weak interactions and neutrinos* 62-6. [hep-ex/9904028]
A Measurement of sin**2 theta(W) in neutrino N scattering from NuTeV. By NuTeV Collaboration[hep-ex/9906024] (Jan 1999) 7p.
Searches for neutrino mass in the NuTeV experiment. By NuTeV Collaboration In *Cape Town 1999, Weak interactions and neutrinos* 400-40.
Charm production at NuTeV. By NuTeV Collaboration [hep-ex/9906037] (Mar 1999) 4p.
A Measurement of (xF neutrino(3)) (xF anti-neutrino(3)) and R with the CCFR detector. By CCFR-NuTeV Collaboration Nucl.Phys.Proc.Suppl.79:89-92,1999. [hep-ex/9906042]
Strange content of the nucleon (NuTeV). By NuTeV Collaboration In *Bloomington 1999, Physics with a high luminosity polarized electron ion collider* 337-34. [hep-ex/9906038]
Low Q**2 low x structure function analysis of CCFR data for F(2). By CCFR Collaboration Nucl.Phys.A663:344-348,2000. [hep-ex/9908064]
Search for neutral heavy leptons in a high-energy neutrino beam. By NuTeV CollaborationPhys.Rev.Lett.83:4943-4946,1999. [hep-ex/9908011]
Precision calibration of the NuTeV calorimeter. By NuTeV Collaboration Nucl.Instrum.Meth.A447:377-415,2000. [hep-ex/9908056]
Evidence for diffractive charm production in muon-neutrino Fe and anti-muon-neutrino Fe scattering at the Tevatron. By NuTeV Collaboration Phys.Rev.D61:092001,2000. [hep-ex/9909041]
Search for a 33.9-MeV/c**2 neutral particle in pion decay. By NuTeV Collaboration Phys.Rev.Lett.84:4043-4046,2000. [hep-ex/9912062]
Recent QCD results from NuTeV / CCFR Collaboration. By NuTeV/CCFR Collaborations
Measurements of F(2), x F**neutrino(3) - x F**anti-neutrino(3) from CCFR Fe-muon-neutrino and Fe-muon anti-neutrino data in a model independent way. By CCFR/NuTe collaboration [hep-ex/0005021] UR-1605 (Mar 2000) 4p.
Measuring the strange sea at NuTeV. By T. Adams, et al., In *Liverpool 2000, Deep inelastic scattering* 93-9.
New measurements of nucleon structure functions from the CCFR/NuTeVCollaboration. By CCFR / NuTeV Collaboration[hep-ex/0008003] UR-1611 (May 2000) 7p.
Search for light to heavy quark flavor changing neutral currents in muon-neutrino N and anti-muon-neutrino N scattering at the Tevatron. By A. Alton, et al., Phys.Rev.D63:012001,2001. [hep-ex/0007059]
Recent structure function results from neutrino scattering at Fermilab. By CCFR / NuTeV CollaborationIn *Osaka 2000, High energy physics, vol. 1* 441-44. [hep-ex/0010001]
Recent structure function results from CCFR. By CCFR Collaboration In *Liverpool 2000, Deep inelastic scattering* 103-10. [hep-ex/0011095]
Observation of neutral current charm production in muon neutrino Fe scattering at the Tevatron. By NuTeV Collaboration Phys.Rev.D64:012002,2001, Int.J.Mod.Phys.A16S1B:764-766,2001. [hep-ex/0008068]
New measurements of nucleon structure functions from CCRF / NuTeV. By CCRF/NuTeV Collaboration Int.J.Mod.Phys.A16S1A:202-204,2001. [hep-ex/0009061]
Observation of anomalous dimuon events in the NuTeV decay detector: Preliminary. By NuTeV Collaboration Int.J.Mod.Phys.A16S1B:761-763,2001. [hep-ex/0009007]
Measurements of F(2) and x F**neutrino(3) - x F**anti-neutrino(3) from CCFR muon neutrino-Fe and muon anti-neutrino-Fe data in a physics model independent way. By CCFR/NuTeV Collaboration Phys.Rev.Lett.86:2742-2745,2001. [hep-ex/0009041]
A First measurement of low x low Q**2 structure functions in neutrino scattering. By CCFR Collaboration Phys.Rev.Lett.86:5430-5433,2001. [hep-ex/0011094]
Search for light-to-heavy quark flavor changing neutral currents in nu/mu N and anti-nu/mu N scattering. By NuTeV Collaboration Int.J.Mod.Phys.A16S1B:489-491,2001.
Precise measurement of dimuon production cross-sections in muon neutrinoFe and muon anti-neutrino Fe deep inelastic scattering at the Tevatron.By NuTeV CollaborationPhys.Rev.D64:112006,2001. [hep-ex/0102049]
Search for the lepton number violating process anti-neutrino(muon) e- ---> muon- anti-neutrino(e). By NuTeV CollaborationPhys.Rev.Lett.87:071803,2001. [hep-ex/0104029]
Observation of an anomalous number of dimuon events in a high-energy neutrino beam. By NuTeV Collaboration Phys.Rev.Lett.87:041801,2001. [hep-ex/0104037]
Extraction of R = sigma(L) / sigma(T) from CCFR Fe-neutrino(muon) and Fe-anti-neutrino(muon) differential cross-sections. By CCFR/NuTeV CollaborationPhys.Rev.Lett.87:251802,2001. [hep-ex/0104040]
Extraction of R = sigma(L) / sigma(T) from CCRF Fe neutrino(muon) and Fe anti-neutrino(muon) differential cross-sections. By CCFR/NuTeV Collaboration [hep-ex/0105067] UR-1635 (May 2001) 4p.
Preliminary measurement of the differential cross-section from neutrino nucleon deeply inelastic scattering at NuTeV. By NuTeV Collaboration [hep-ex/0107082] (Jul 2001) 4p.
Differential cross section results from NuTeV. By D. Naples, et al.,In *Budapest 2001, High energy physics* hep2001/00.
A Precise determination of electroweak parameters in neutrino nucleon scattering. By NuTeV Collaboration Phys.Rev.Lett.88:091802,2002. [hep-ex/0110059]
On the effect of asymmetric strange seas and isospin violating parton distribution functions on sine**2 theta(W) measured in the NuTeV experiment. By NuTeV Collaboration Phys.Rev.D65:111103,2002. [hep-ex/0203004]
A Search for muon-neutrino ---> electron-neutrino and muon-anti-neutrino---> electron-anti-neutrino oscillations at NuTeV. By S. Avvakumov, et al., Phys.Rev.Lett.89:011804,2002. [hep-ex/0203018]
A Departure from prediction: Electroweak physics at NuTeV. By K.S. McFarland, et al.,[hep-ex/0205080] (May 2002) 16p.
Reply to the comment on ``a precise determination of electroweak parameters in neutrino-nucleon scattering''. By NuTeV Collaboration [hep-ex/0207052] (Jul 2002)
A Study of Simulated Measurements of W Boson Helicity in the Decay t Wb at the Collider Detector at Fermilab, Brock Tweedie and Kevin McFarland, Journal of Young Investigators, Issue 1, March 2003, http://www.jyi.org/volumes/volume7/issue1/articles/tweedie.html
Search for Strange-Charmed Pentaquark States in the 1.96 TeV ppbar collision, Scott Field (Prof. Arie Bodek), University of Rochester APS conference 2005,http://meetings.aps.org/Meeting/APR05/Event/29664
Simulation of Top Quark Pair Production as a Background for Higgs Events at the Compact Muon Solenoid, Christopher Justus, James Dolen, Regina Demina
(University of Rochester) APS conference 2005 http://meetings.aps.org/Meeting/APR05/Event/29432
Dolen, James (Demina, Regina) -Simulation of ttbar Events as a Background for the ttH at the Compact Muon Solenoid Experiment- Physics NCUR proceedings 2005
Kleckner, Ian (McFarland, Kevin) - Calculating the Magnetic Moment of Cosmic-Ray Muons; Physics NCUR proceedings 2005,
Study on the Effects of Layered Threshold Cuts on Noise in the CMS Calorimeter,Christopher Justus, R. Demina (University of Roceshter), J. Dolen (University of Rochester)R. Harris (FNAL), P. Tipton (University of Rochester), M. Zielinski (University of Rochester) American Physical Society Conference Spring 2006. APR06-2006-000317 http://meetings.aps.org/Meeting/APR06/Event/47372
Study of Cell Energy Thresholds in CMS Calorimeters for Jet Reconstruction, J. Dolen, R. Demina, C. Justus, P. Tipton, M. Zielinski (University of Rochester)
A. Bhatti (Rockefeller University R. Harris (FNAL), American Physical Society Conference Spring 2006. APR06-2006-000319
Finding the Charge of the top quark in the Dilepton Channel, Beretvas, A.; Antos, J.; Chen, Y. C.; Gunay, Z.; Sorin, V.; Tollefson, K.; Bednar, P.; Tokar, S.; Boisvert, V.;Hopkins, W.; McFarland, K, Presented at Symposium on Hadron Collider Physics 2006 (HCP 2006), Durham, North Carolina, 22-26 May 2006 2007arXiv0707.1339B
ELECTRON SCATTERING AND PION PRODUCTION IN RELATION TO NEUTRINO-NUCLEON INTERACTIONS, Scherrer, Elizabeth Proceedings of NCUR 2007 Conference. http://www.dominican.edu/query/ncur/display_ncur.php?id=756 NCUR 2007
.ANALYSIS OF NOISE IN MAGNETIC RESONANCE DIFFUSION TENSOR IMAGING Serafini, John, Proceedings of NCUR 2007 Conference,http://www.dominican.edu/query/ncur/display_ncur.php?id=2834 NCUR 2007
P. DETECTION AND ANALYSIS OF COSMIC RAY SHOWERS Webster, Jordan, proceedings of NCUR 2007 Conference http://www.dominican.edu/query/ncur/display_ncur.php?id=892NCUR 2007
Bublitz, Adam (UR Physics) McFarland, Kevin UR Physics VERTICAL SLICE TEST Proceedings of NCUR 2008 Conference.
Zimmerman, Brandon (UR Optics ) Stroud, Carlos UR Optics/Physics QUANTUM TENNIS proceedings of NCUR 2008 Conference
Webster, Jordan (UR Physics) Akchurin, Nural ( Texas Tech) ANALYSIS OF MOMENTUM RESOLUTION IN VLE BEAMLINES Proceedings of NCUR 2008 Coference.
CMS AN-2008/001 -- Performance of Jet Algorithms in CMS
Authors: P. Schieferdecker P. Kurt G. Dissertori F. Chlebana, D. Elvira, K. Kousouris L. Apanasevich, C. Dragoiu, A. Smoron, N. Varelas F. Ratnikov {University of Maryland, College Park, MD, USA.\footnote } Z. Qi, M. Zielinski A. Bhatti
CMS AN-2008/002 -- Performance of the SISCone Jet Clustering Algorithm
Authors: A. Bhatti F. Chlebana, R. Harris, K. Kousouris Z. Qi, M. Zielinski F. Ratnikov {University of Maryland, College Park, MD, USA. \footnote } N. Varelas, C. Dragoiu M. Jha P. Kurt, H. Topakli G. Dissertori P. Schieferdec
CMS AN-2010/024 -- Update of calorimeter cell and tower thresholds for jet reconstruction in first CMS collision data
Authors: V. Chetluru, J. Hirschauer,K. Ozdemir, Z. Qi, M. Zielinsk
Methods to Determine Neutrino Flux at Low Energies:Investigation of the Low $ν$ Method,A. Bodek,U. Sarica, D. Naples, L. Ren. The European Physical Journal C - Particles and Fields, 2012, Volume 72, Number 4, page 1973
Methods to Determine Neutrino Flux at Low Energies: Investigation of the Low ν Method, A,U. Sarica, A. Bodek. D. Naples, L. RenAmerican Physical Society, APS April Meeting 2012, March 31-Apr 3, 2012, abstract #T11.010
Extraction of Neutrino Flux with the Low $ν$ Method at MiniBooNE Energies, A. Bodek, U. Sarica, K. S. Kuzmin, V. A. Naumov, to be published in proceedings CIPANP 2012, St. Petersburg, FL, June 2012, arXiv:1207.1247 [hep-ex]
Extracting Muon Momentum Scale Corrections for Hadron Collider Experiments, A. Bodek, A. an Dyne, W. Sakumot, A. Strelnikov, to be published in EPJC 2012,arXiv:1208.3710 [hep-ex]

Experiment: Nuclear Physics (Journal articles and Conf. Proceedings 1994-2008

Band Crossing in Shape Transition Nuclei ^109,111Ru, Riley, D.; Wu, C. Y.; Hua, H.; Cline, D.; Hayes, A. B.; Teng, R.; Clark, R. M.; Fallon, P.; Goergen, A.; Macchiavelli, A. O.; Vetter, K. American Physical Society, Division of Nuclear Physics Meeting, 27-30 October, 2004, Chicago, IL. MEETING ID: DNP04., abstract #CK.063, 2004APS..DNP.CK063R
F. L. H. Wolfs, C. A. White, D. C. Bryan, C. G. Freeman, D. M. Herrick, K. L. Kurz, D. H. Mathews, P. A. A. Perera, and M. T. Zanni, Breakup of 87 MeV ¹¹B, Physical Review C (Nuclear Physics), Volume 49, Issue 5, May 1994, pp.2538-2548, (10.1103/PhysRevC.49.2538)
C. G. Freeman, D. M. Herrick, D. C. Bryan, K. L. Kurz, D. H. Mathews, P. A. A. Perera, F. L. H. Wolfs, and M. T. Zanni, New focal plane detector system for the rochester recoil mass spectrometer, Nuclear Instruments and Methods in Physics Research Section A, v. 357, p. 450-457, 1995 1995NIMPA.357..450F
D. M. Herrick, F. L. H. Wolfs, D. C. Bryan, C. G. Freeman, K. L. Kurz, D. H. Mathews, P. A. A. Perera, and M. T. Zanni, Elastic Scattering and Quasielastic Transfer for 32S + 96, 100Mo at Elab = 180 MeV, Phys. Rev. C52, 744 (1995). 1995PhRvC..52..744H
Alexander, Megan; Miner, Daniel; Skulski, Wojtek; Wolfs, Frank, Online Muon Capture and Decay Experiment American Physical Society, APS March Meeting, March 13-17, 2006, abstract #V42.009 2006APS..MARV42009A
Evidence for possible shape transitions in neutron-rich Ru isotopes: Spectroscopy of Ru109,110,111,112, Wu, C. Y.; Hua, H.; Cline, D.; Hayes, A. B.; Teng, R.; Riley, D.; Clark, R. M.; Fallon, P.; Goergen, A.; Macchiavelli, A. O.; Vetter, K. Physical Review C, vol. 73, Issue 3, id. 034312, 2006 10.1103/PhysRevC.73.034312
Nuclear Structure Research at TRIUMF, Garrett, P. E.; Andreyev, A.; Austin, R. A. E.; Ball, G. C.; Bandyopadhyay, D.; Becker, J. A.; Boston, A. J.; Chakrawarthy, R. S.; Cline, D.; Cooper, R. J., ... Whitbeck, A. et al., Acta Physica Polonica B, vol. 38, Issue 4, p.1169, 2007 2007AcPPB..38.1169G
TRIUMF-ISAC Gamma-Ray Escape-Suppressed Spectrometer (TIGRESS): a versatile tool for radioactive beam physics, Ball, G. C.; Andreyev, A.; Austin, R. A. E.; Bandyopadhyay, D.; Becker, J. A.; Boston, A. J.; Boston, H. C.; Chen, A.; Churchman, R.; Cifarelli, F, ,,, Cline D, Whitbeck, A, et al, Nuclear Physics A, Volume 787, Issue 1-4, p. 118-125., 2007, 2007NuPhA.787..118B
The TRIUMF nuclear structure program and TIGRESS, Garrett, P. E.; Andreyev, A.; Austin, R. A. E.; Ball, G. C.; Bandyopadhyay, D.; Becker, J. A.; Boston, A. J.; Boston, H. C.; Chakrawarthy, R. S.; Churchman, R, ....Cline, D, Whitbeck, A, et al Nuclear Instruments and Methods in Physics Research Section B, Volume 261, Issue 1-2, p. 1084-1088., 20072007NIMPB.261.1084G
M.A. Schumaker..Cline, D, Whitbeck, A, et al. Coulomb Excitation of Radioactive 21Na with TIGRESS, Proceedings of the Internatinoal Nuclear Physics Conference, Tokyo, 2007.

Experimental &Theoretical Condensed Matter/Biological/Chemical Physics pubs with undergraduates) Journal articles and Conf. Proceedings 1994-2008

R. C. Gilmore and R. S. Knox Perrin's model revisited: a simplified approach to time-dependent optical anisotropy for nearly degenerate states Paper G13 2, APS meeting,Pittsburgh, PA, Tue., Mar. 22, 1994 Bull. Am. Phys. Soc. 39, 382-383 (1994)
Carlo Williams, Femtosecond Solid State Lasers - Principles and Applications (R. Sobolewski).Proceedings of at 8th NCUR Conference, Western Michigan Univ. Kalamazoo MI (1994)
Di Wu, Electrical Transport Properties of YBa2C307-x Superconductors(R. Sobolewski), Proceedings of 8th NCUR Conference, Western Michigan Univ. Kalamazoo MI (1994)
R. S. Knox and D. A. Sawicki Spectral variation and the Kennard-Stepanov temperature. A possible new signature of excited-state relaxation processes Paper M-AM-G7, Biophysical Society Annual Meeting, Baltimore, MD Mon. Feb. 19, 1996 Biophys. J. 70, A131(Abtract) (1996)
Aging Behaviors of a Sulfonium Precurson Polymer of Poly (P-Phenylene Vilynen) in Methanol Solution, M.R.. Robinson, H. Razafitrimo, Y. Gao, B. Hsieh, Plym.Mater.Sci. Eng. 74: 292 (1996).
Aging Behaviors of a Sulfonium Precurson Polymer of Poly (P-Phenylene Vilynen) in Methanol Solution, M. Robinson, H. Razafitrimo, Y. Gao, B. Hsieh, ABSTR PAP AM CHEM S 211: 176-PMSE Part 2 MAR 24 1996).
The Relationship of Intercompartmental Excitation Transfer Rate Constants to Those of an Underlying Physical Model,. C. Holcomb and R. Knox. 13th Annual Eastern Regions Photosynthesis Conference, Woods Hole; April, 1996.
A New Approach to the Kennard-Stepanov Relation, D. A. Sawicki , R. Knox. 13th Annual Eastern Regional Photosynthesis Conference, Woods Hole; April, 1996.
R. S. Knox, P. D. Laible, D. A. Sawicki and M. F. J. Talbot, Does excited chlorophyll a equilibrate in solution? Talk and Paper, International Conference on Luminescence (ICL '96), Prague, CzechRepublic, Mon., Aug. 19, 1996
Effect of Conversion Temperature and Time on Photoluminescence Spectra of POLY(2,3-DIPHENYL-P-PHENYLEN VINYLENE ( DP-PPV), Y. Choong, J. Vitale, Razafitrimo, Y. Gao, et. al.American Physical Society Meeting, St. Louis; March, 1996.
Dynamic Confinement Ultra -Cold Atoms: Demostration of RODiO Trap (Rotating Off-resonant Dipoe Optical Trap). P. Rudy, R. Ejnisman, A. Rahman, S. Lee, N. P. Bigelow. Abstract in Proceedings of the 12th Interdisciplinary Laser Science Conference, Rochester, NY, 1996.
Finite Size Effects on Electroluminescense of Nanoscale Semiconductor Polymer Heterojunctions, by S. A. Jenekhe, X. Zhang, X. L. Chen, V. Choong, J. J.Vitale, Y. Gao, and B. R. Hsieh. Chem. Materials Vol. 9, 409(1997).
M.A. Aeschlimann, E. Hull, J. Cao, C.A. Schmuttenmaer, L.G. Jahn, Y. Gao, H.E. Elsayed-Ali, D.A. Mantell, and M.R. Scheinfein, "A Picosecond Electron Gun for Surface Analysis," Rev. Nucl. Instrum. 66, 1000 (1995).
M.A. Aeschlimann, E. Hull, C.A. Schmuttenmaer, J. Cao, Y. Gao, D.A. Mantell, and H.E. Elsayed-Ali, "Time-Resolved Electron Diffraction to Study Photoinduced Molecular Dynamics at Single Crystal Surfaces," Proc. SPIE 2521, 103 (1996).
V. Choong, J. J. Vitale, H. Razafitrimo, Y. Gao, C. W. Tang, and B. R. Hsieh, "Effects of Conversion Temperature and Time on Photoluminescence spectra of Poly(2,3-diphenyl-1,4-phenylenevinylene) (DP-PPV)," American Physical Society, St. Louis, March 1996.
Perrin Model Revisited: A Simplified Approach to Time-Dependent Optical Polarization”, R. S. Knox and R. Gilmore , Journal of Luminescence 63 (1995) 163-175
The Relationship of Intercompartmental Excitation Transfer Rate Constants to those of an Underlying Physical Model, C. T. Holcomb and R. S.Knox, in Photosynthesis Research 50 117-131 (Nov. 1996).
Universal Relationship between Emission and Absorption: An Alternative Approach, D. A. Sawicki and R. S. Knox, Phys Rev. A 54 , 4837-1831 (Dec 1996).
R. S. Knox, P. D. Laible, D. A. Sawicki and M. F. J. Talbot, Does excited chlorophyll a equilibrate in solution? published in Proceedings of the International Conference on Luminescence (ICL '96), Prague, Czech Republic, Mon., Aug. 19, 1996
Does Excited Chlorophyl A Equilibrate in Solution? R.S. Knox, P. D. Laible, D. A. Sawicki, M. J. Talbot, presented at the 1996 Int. Conf. on Luminescince, Prague; pub. in proceedings issue of Journal of Luminescence 72-4, 580-581 (1997).
T.H. Foster, E. L. Hull, M.G. Nichols, D.S. Rifkin, and N. Schwartz. Two steady-state methods for localizing a fluorescent inhomogeneity in a turbid medium. In Optical Tomography and Spectroscopy of Tissue: Theory, Instrumentation, Model, and Human Studies II. SPIE proceedings, Vol. 2979, 741-749 (1997).
E.W. Forsythe, B.R. Hsieh, Y.Yu, S.J. Konezny, P. Roche, J. Casperson, and Yongli Gao, „Coumarin 6 Doped DP6-PPV Light Emitting Diodes,‰ American
Physical Society conference , Los Angelos, March 1998.
Hypothesis: part of the fluorescence of chlorophyll a may originate in higher triplet states Robert S Knox, Jamin S Brown, Philip D Laible, and Mary F J Talbot Photosyn. Res., Res. 60, 165-177 (1999)
Robert S. Knox and Lisa F. Marshall The Kennard-Stepanov relation for time-resolved fluorescence J. Luminescence 85, 209-215 (2000)
Polarons in DNA Conwell EM; Rakhmanova SV, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA Volume: 97 Issue: 9 Pages: 4556-4560 DOI: 10.1073/pnas.050074497 Published: APR 25 2000
Mitra S, Finlay JC, McNeill D, et al. Photochemical oxygen consumption, oxygen evolution and spectral changes during UVA irradiation of EMT6 spheroids PHOTOCHEM PHOTOBIOL 73 (6): 703-708 JUN 2001
"Aggregation Effects on the Structure and Optical Properties of a Model PPV Oligomer," C.J. Collison, V. Treemaneekarn, W. Oldham, Jr., J. H. Hsu, and L.J. Rothberg, Synth. Met., 119 (1-3), 515-518, Sp. Iss. SI (2001).
"Conformational Effects on the Photophysics of Conjugated Polymers: A Two Species Model for MEH-PPV Spectroscopy and Dynamics," C.J. Collison, L.J. Rothberg, V. Treemaneekarnand Y. Li, Macromolecules, 34 (7), 2346-2352 (2001).
Hole traps in DNA Conwell EM; Basko DM, JOURNAL OF THE AMERICAN CHEMICAL SOCIETY Volume: 123 Issue: 46 Pages: 11441-11445 DOI: 10.1021/ja015947v Published: NOV 21 2001
S. Raychaudhuri, Cory Przybyla, Y. Shapir, Michael Cranston, , "Maximal Height Scaling of Kinetically Growing Surfaces", Physical Review Letters, vol. 87, (2001),
Self-trapping versus trapping: application to hole transport in DNA. Basko D M;Conwell E MPhysical review. E, Statistical, nonlinear, and soft matter physics Volume: 65 Issue: 6 Pt 1 Pages: 061902 DOI: 10.1103/PhysRevE.65.061902 Published: 2002-Jun(Epub 2002 Jun 11)
Effect of solvation on hole motion in DNA. Basko D M; Conwell E M
Source: Physical review letters Volume: 88 Issue: 9 Pages: 098102 DOI:10.1103/PhysRevLett.88.098102 Published: 2002-Mar-4 (Epub 2002 Feb 14)
Stationary Polaron motion in a polymer chain at high electric fields
Basko DM; Conwell EM PHYSICAL REVIEW LETTERS Volume: 88 Issue: 5 Article Number: 056401 DOI: 10.1103/PhysRevLett.88.056401 Published: FEB 4 2002
Robert S. Knox, Demet Gülen, and Katie E. Lotterhos Effect of inhomogeneous broadening on the fluorescence anisotropy of a square-symmetric molecule Chem. Phys. Lett. 361, 285-290 (2002)
Robert S. Knox and Bryan Q. Spring , Dipole strengths in the chlorophylls, Photochem. and Photobiol. 77, 497-501 (2003)
"Lattice Gas Dynamics: Application to Driven Vortices in Two Dimensional Superconductors
Violeta Gotcheva, Albert T. J. Wang and S. Teitel, Phys. Rev. Lett. 92, 247005 (2004) (Work of 2001 APS Apker Award Finalist Albert Wang)
Continuous Time Monte Carlo and Spatial Ordering in Driven Lattice Gases: Application to Driven Vortices in Superconducting Networks Violeta Gotcheva, Yanting Wang, Albert T. J.Wang and S. Teitel Phys. Rev. B 72, 064505 (2005)
S. Mitra, E.M. Goren, J.G. Frelinger, and T.H. Foster. Activation of heat shock protein 70 promoter with mTHPC-photodynamic therapy reported by green fluorescent protein in vitro and in vivo. Photochem. Photobiol. 78, 615-622 (2003).
Excited-state energy flow in covalently linked multiporphyrin arrays: The essential contribution of energy transfer between nonadjacent chromophores, Eve Hindin, Robert A. Forties, Robert S. Loewe, Arounaguiry Ambroise, Christine Kirmaier, David F. Bocian, Jonathan S. Lindsey, Dewey Holten, and Robert S. Knox Source: JOURNAL OF PHYSICAL CHEMISTRY B Volume: 108 Issue: 34 Pages: 12821-12832 Published: AUG 26 2004
Roughness of a Tilted Anharmonic String at Depinning, T. Goodman and S. Teitel Phys. Rev. E 69, 062105 (2004)
Chung Ki Wong, Todd Fallesen, Patrick R. Connelly, Jianhui Zhong. Enhanced Contrast of Signal from Distant Dipolar Field on Relaxation Times and B0 in Tissues. Proc. Intl. Soc. Mag. Reson. Med. 11 (2004), p183. Kyoto, Japan, May 15-21, 2004.
Structural basis for the spectroscopy and photophysics of solution-aggregated conjugated polymers, "A. Menon, M. Galvin, Ken A. Walz (RET) and L. J. Rothberg, Synth. Met. 141 (1-2): 197-202 (2004).
Polarons in DNA: Transition from guanine to adenine transport , Conwell EM; Park JH; Choi HY, JOURNAL OF PHYSICAL CHEMISTRY B Volume: 109 Issue: 19 Pages: 9760-9763 DOI: 10.1021/jp044485f MAY 19 2005
Conwell, EM; Bloch, SM, "Base sequence effects on transport in DNA", JOURNAL OF PHYSICAL CHEMISTRY B, p. 5801, vol. 110, (2006). Published, 10.1021/jp055398
Effect of water drag on diffusion of drifting polarons in DNA
Conwell E. M.; Basko D. M.: JOURNAL OF PHYSICAL CHEMISTRY B Volume: 110 Issue: 46 Pages: 23603-23606 DOI: 10.1021/jp064373j NOV 23 2006
Doping Induced Energy Level Shift in Organic Semiconductors, Ding, Huanjun;Green, Kate; Gao, Yongli American Physical Society, APS March Meeting, March 13-17, 2006, abstract #H28.007 Publication Date: 03/2006 2006APS..MARH28007D
Mitra, S; Cassar, SE; Niles, DJ; Puskas, JA; Frelinger, JG; Foster, TH, "Photodynamic therapy mediates the oxygen-independent activation ofhypoxia-inducible factor 1 alpha", MOLECULAR CANCER THERAPEUTICS, p. 3268, vol. 5, (2006). Published, 10.1158/1535-7163.MCT-06-042
Conwell, EM; Bloch, SM; McLaughlin, PM; Basko, DM, "Duplex polarons in DNA", JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, p. 9175, vol. 129, (2007). Published, 10.1021/ja069147
Tong Zhu, Xiaoxu Liu, John Serafini, Patrick Connelly, Jianhui Zhong. Quantitative Comparisons of Measurement Uncertainty in Human Brain Data with Different DTI Protocols Using a Wild Bootstrap Method. Proc. Intl. Soc. Mag. Reson. Med. 15: 1583. (2007), Berlin Germany, May 9-25, 2007
John Serafini, Jianhui Zhong, Analysis of Noise in Magnetic Resonance Diffusion Tensor Imaging, proceedings of NCUR 2007
Conwell, EM; McLaughlin, PM; Bloch, SM, "Charge-transfer excitons in DNA", JOURNAL OF PHYSICAL CHEMISTRY B, p. 2268, vol. 112, (2008). Published, 10.1021/jp077344
Ben Martin (with Lewis Rothberg), Abstract ACS National Meeting April 2008
H. Ding, Kate Green, and Y. Gao, „Electronic Structure Modification of Copper Phthalocyanine (CuPc) Induced by Intensive Na Doping, Chemical Physics Letters, v. 454, iss. 4-6, p. 229-232. (2008) 2008CPL...454..229D
Polarons in DNA Oligomers Author(s): Kucherov Victor M.; Kinz-Thompson Colin D.;Conwell Esther M. JOURNAL OF PHYSICAL CHEMISTRY C Volume: 114 Issue: 3 Pages:1663-1666 DOI: 10.1021/jp908809t JAN 28 2010
Proton Transfer in Adenine-Thymine Radical Cation Embedded in B-Form DNA Kinz-Thompson Colin; Conwell Esther , JOURNAL OF PHYSICAL CHEMISTRY LETTERS Volume: 1 Issue: 9 Pages: 1403-1407 DOI: 10.1021/jz100214h MAY 6 2010
Localization of a Hole on an Adenine-Thymine Radical Cation in B-Form DNA in Water Kravec S. M.; Kinz-Thompson C. D.; Conwell E. M.JOURNAL OF PHYSICAL CHEMISTRY B Volume: 115 Issue: 19 Pages: 6166-6171 DOI: 10.1021/jp110062y MAY 19 2011

Experimental Astrophysics (publications with undergarduates) Journal articles and Conference Proceedings 1994-2008

Analysis of Star Formation Region L988-e. Galayda, Suzanne;Pipher, Judith, American Physical Society, APS/AAPT Joint Meeting, May 2-5, 1996, abstract #A10.04 Publication Date: 05/19961996APS..MAY.A1004G
Near Infrared Observations of the Star Formation Region AFGL 63, McMurtry, C. W.; Woodward, C. E.; Pipher, J. L.; Forrest, W. J. American Astronomical Society, 193rd AAS Meeting, #72.08; Bulletin of the American Astronomical Society, Vol. 30, p.1360 Publication Date: 12/1998 998AAS...193.7208M
Magnetohydrodynamical Wave Support of Interstellar Molecular Clouds. Zingale, Michael;Wardle, Mark,
American Physical Society, APS/AAPT Joint Meeting, May 2-5, 1996, abstract #A10.01
Publication Date: 05/1996 1996APS..MAY.A1001Z
The Variability of Seyfert 1.8 and 1.9 Galaxies at 1.6 microns, Quillen, A. C., Shaked, S., Alonso-Herrero, A., McDonald, C., Lee, A., Rieke, M. J., Rieke, G. H. 2000, Astrophysical Journal Letters, 532, L17
Dust lanes Causing Structure in the Extended Narrow Line Region of Early-type Seyfert galaxies, Quillen, A. C., Alonso-Herrero, A., Rieke, M. J., McDonald, C., Falcke, H., & Rieke, G. H. 1999, Astrophysical Journal, 525, 685
Detection of CO J = 2 -> 1 Emission from Polar Ring Galaxies Newsletter of the Astronomical Society of New York, Volume IV, No. 5, 16 (1994) L. Buccholz
Near-Infrared Spectra of Impact Debris Produced by the Impact of Comet Shoemaker-Levy 9. Newsletter of the Astronomical Society of New York, Volume IV, No. 2, 6 (1996) B. Fisher, J. Hoffman
1994 Detection of CO J = 2 * 1 Emission In The Polar Rings Of NGC 2685 and NGC 4650A, D. M. Watson, Matthew T. Guptill and L. M. Buchholz, Astrophys. J. (Letters) 420, L21W (1994).
Bracket Gamma, Molecular Hydrogen, and Singly-Ionized Iron in GGD 37 (Cep A West) RAINES, S. N.; WATSON, D. M.; FORREST, W. J.; PIPHER, J. L.; DELAMARTER, G.; WOODWARD, C. E.; HODGE, T.; GREENHOUSE, M. A.; SMITH, H. A.; SATYAPAL, S.; FISCHER, J.; THOMPSON, K. L.; MUZEROLLE, J American Astronomical Society Meeting, 189, #50.04 (12/1996).
Magnetohydrodynamical Wave Support of Interstellar Molecular Clouds, M. Zingale and M. Wardle. Bulletin of The American Physial Society (1996); presented at the American Physial Society Meeting, Indianapolis, 1996.
Analysis of Star Formation Region L1988-e, S. Galayda, J. Pipher. Bulletin of The American Physial Society (1996); APS Meeting, Indianapolis, 1996.
Near Infrared Images of the H-H Objects GGD37 (Cep A W). Newsletter of the Astronomical Society of New York, Volume V, No. 2, 7 (1997) S.N. Raines, G. Delamarter, D. Watson, J. Pipher, W. Forrest, C. Woodward, M. Greenhouse, S. Satyapal, H. Smith, J. Fischer, K. Thompson, J. Muzerolle A
Near Infrared Observations of the Star Formation Region AFGL 6366s, 1998 BAAS...193.7208 McMurtry, C. W.; Woodward, C. E.; Pipher, J. L.; Forrest, W. J.
Origin and Evolution of the Egg Nebula, Delamarter, G.; Frank, A.; Vieira, M.; Wood, K.; Welch, C American Astronomical Society, 195th AAS Meeting, #110.09; Bulletin of the American Astronomical Society, Vol. 31, p.1537 Publication Date: 12/1999 1999AAS...19511009D
NICMOS Survey of Early-Type Galaxy Centers: The Relation Between Core Properties, Gas and Dust Content and Environment, Quillen, A. C., Bower, G. B., Stritzinger, M. 2000,Astrophysical Journal Suppliment, 128, 85
A Near Infrared Study of the Star Formation Region L 988e, Barczys, Matthew Journal: News Letter of the Astronomical Society of New York, Vol. 5, No. 9, p.11 Publication Date: 02/2001
A comparison between Pa alpha and H alpha emission:the relation between mean HII region reddenings, local gas density andmetallicity, Quillen, A. C., & Yukita, M. 2001, AJ, 121, 2095
The Multitude of Unresolved Continuum Sources at 1.6 microns in HST images of Seyfert galaxies}, Quillen, A. C., McDonald, C., Alonso-Herrero, A., Lee, A., Shaked, S., Rieke, M. J., & Rieke, G. H. 2001, Astrophysical Journal, 547, 129
Poster at the DPS: "The contrast of dusty rings caused by capture into external mean-motion resonances in extra-solar planetary systems", Quillen, A. C., Thorndike, S. American Astronomical Society, Division of Planetary Sciences meeting 34, #30.04 9/20022002DPS....34.3004Q
Structure in the Epsilon Eridani dusty disk caused by mean motion resonances with a 0.3 eccentricity planet at periastron, Quillen, A. C., & Thorndike, S. The Astrophysical Journal, Volume 578, Issue 2, pp. L149-L152. Publication Date: 10/2002 10.1086/344708 2002ApJ...578L.149Q
The Spitzer GTO Survey of Circumstellar Disks in Young Stellar Clusters, Muzerolle, J.; Gorlova, N.; Rieke, G. H.; Siegler, N.; Young, E. T.; Megeath, S. T.; Allen, L. E.; Fazio, G. G.; Hartmann, L.; Lada, C. J.; Luhman, K. L.; Myers, P. C.; Porras, A.; Sicilia-Aguilar, A.; Flaherty, K.; Gutermuth, R.; Stauffer, J. R.American Astronomical Society Meeting 205, #17.01; Bulletin of the American Astronomical Society, Vol. 36, p.1364 Publication Date: 12/2004, 10.1017/S1743921305004783 ,2004AAS...205.1701M
The Outburst of V1647 Orionis Revealed by Spitzer, 2005 ApJ...620L.107 Muzerolle, J.; Megeath, S. T.; Flaherty, K. M.; Gordon, K. D.; Rieke, G. H.; Young, E. T.; Lada, C. J. The Astrophysical Journal, Volume 620, Issue 2, pp. L107-L110. (ApJ Homepage) Publication Date: 02/2005 2005ApJ...620L.107M
The Remarkable Diversity of Protostars and Circumstellar Disks in NGC 2068/2071, Muzerolle, J.; Megeath, S. T.; Allen, L. E.; Flaherty, K.; Young, E.; Rieke, G. H. , Protostars and Planets V, Proceedings of the Conference held October 24-28, 2005, in Hilton Waikoloa Village, Hawai'i. LPI Contribution No. 1286., p.8464 Publication Date: 00/2005 2005prpl.conf.8464M
The Outburst of V1647 Orionis Revealed by Spitzer, Muzerolle, J.; Megeath, S. T.;Flaherty, K. M.; Gordon, K. D.; Rieke, G. H.; Young, E. T.; Lada, C. J.The Astrophysical Journal, Volume 620, Issue 2, pp. L107-L110. Publication Date: 2005ApJ...620L.107M02/2005 10.1086/428832
Characterization of 2.5 micron HgCdTe VIRGO/VISTA detector array 2005 SPIE.5902..152 McMurtry, Craig W.; Allen, Thomas S.; Moore, Andrew C.; Forrest, William J.; Pipher, Judith L. : published in Focal Plane Arrays for Space Telescopes II. Edited by Grycewicz, Thomas J.; Marshall, Cheryl J. Proceedings of the SPIE, Volume 5902, pp. 152-160 (2005). (SPIE Homepage) Publication Date: 08/2005 2005SPIE.5902..152M
Spitzer Survey of Protostars and Disks in Embedded Clusters, Gutermuth, R. A.; Megeath, S. T.; Pipher, J. L.; Allen, T. S.; Williams, J. P.; Allen, L. E.; Myers, P. C.; Fazio, G. G. published in Protostars and Planets V, Proceedings of the Conference held October 24-28, 2005, in Hilton Waikoloa Village, Hawai'i. LPI Contribution No. 1286., p.8585
Publication Date: 00/2005 2005prpl.conf.8585G
Decay of interplanetary coronal mass ejections and Forbush decrease recovery times, Penna, RF; Quillen, AC, JOURNAL OF GEOPHYSICAL RESEARCH-SPACE PHYSICS Volume:110 Issue: A9 Article Number: A09S05 Published: SEP 20 2005
Modeling the Structure of Class I Young Stellar Objects, McClure, M.; Furlan, E.; Calvet, N.; Uchida, K.; d'Alessio, P.; Hartmann, L.; Watson, D.; Forrest, B. American Astronomical Society Meeting 207, #185.13; Bulletin of the American Astronomical Society, Vol. 37, p.1477
Publication Date: 12/2005 2005AAS...20718513M
Volume-Limited Survey for Wide Substellar Companions to Nearby Stars, LaPage, A. A.; Koerner, D. W.; Labrier, D.; Brammeier, P.; Keller, J.; Case, A.merican Astronomical Society Meeting 207, #68.07; Bulletin of the American Astronomical Society, Vol. 37, p.1267
Publication Date: 12/2005, 2005AAS...207.6807L
Disks in transition in the Taurus population: Spitzer-IRS spectra of GM Aurigae and DM Tauri, N. Calvet, P. dAlessio, Dan M. Watson, R. Franco-Hernandez, E. Furlan, J.D. Green, P.M. Sutter, W.J. Forrest, L. Hartmann, K.I. Uchida, L.D. Keller, B. Sargent, J. Najita, T.L. Herter, D.J. Barry, and P. Hall, Astrophys. J (Letters) 630, L185 (2005).
Characterization of 2.5 micron HgCdTe VIRGO/VISTA detector array, McMurtry, Craig W.;Allen, Thomas S.; Moore, Andrew C.; Forrest, William J.; Pipher, Judith L., , Focal Plane Arrays for Space Telescopes II. Edited by Grycewicz, Thomas J.; Marshall, Cheryl J. Proceedings of the SPIE, Volume 5902, pp. 152-160 (2005). Publication Date: 08/2005 10.1117/12.617789, 005SPIE.5902..152M
A Spitzer/IRAC survey of the Orion Molecular Clouds, Megeath, S. T.; Flaherty, K. M.; Hora, J.; Allen, L. E.; Fazio, G. G.; Hartmann, L.; Myers, P. C.; Muzerolle, J.; Pipher, J. L.; Siegler, N.; Stauffer, J. R.; Young, E. 2005IAUS..227..383M
A Numerical Study of Outflow-blown Cavities, Cunningham, A. J.; Thorndike, S. L.;Frank, A.; Quillen, A. C.; Blackman, E. G., Protostars and Planets V, Proceedings of the Conference held October 24-28, 2005, in Hilton Waikoloa Village, Hawai'i. LPI Contribution No. 1286., p.8426
Publication Date: 00/2005 2005prpl.conf.8426C
IRS Spectroscopy of Dust Around Nearby, Main Sequence Stars, Chen, C. H.; Uchida, K. I.; Bohac, C.; Leisenring, J.; Jura, M.; Watson, D. M.; Forrest, W. J.; Sargent, B. A.; Sloan, G. C.; Keller, L. D.; Najita, J. rotostars and Planets V, Proceedings of the Conference held October 24-28, 2005, in Hilton Waikoloa Village, Hawai'i. LPI Contribution No. 1286., p.8583 Publication Date: 00/2005 2005prpl.conf.8583C
Turbulence Driven by Outflow-blown Cavities in the Molecular Cloud of NGC 1333,Quillen, Alice C.; Thorndike, Stephen L.; Cunningham, Andy; Frank, Adam; Gutermuth, Robert A.; Blackman, Eric G.; Pipher, Judith L.; Ridge, Naomi he Astrophysical Journal, Volume 632, Issue 2, pp. 941-955. (ApJ Homepage) Publication Date: 10/20052005ApJ...632..941Q
Quillen, AC; Faber, P, "Chaotic zone boundary for low free eccentricity particles near an eccentric planet", MONTHLY NOTICES OF THE ROYAL ASTRONOMICAL SOCIETY, p. 1245, vol. 373, (2006). Published, 10.1111/j.1365-2966.2006.11122.
Modelling the structure of Class I young stellar objects, Melissa McClure, Elise Furlan, Nuria Calvet, Keven I. Uchida, Paola d’Alessio, Lee Hartmann, Dan M. Watson, and William J. Forrest. Presented at the 207th meeting of the American Astronomical Society, Washington, DC, 8-12 January 2006. (Bull. AAS 37, 18.513.)
Polycyclic aromatic hydrocarbons orbiting HD 233517, an evolved oxygen-rich red giant, M. Jura, C.J. Bohac, B. Sargent, W.J. Forrest, J.D. Green, D.M. Watson, G.C. Sloan, L.D. Keller, F. Markwick-Kemper, C.H. Chen and J. Najita, Astrophys. J. (Letters) 637, L45 (2006).
Spitzer-IRS spectroscopy of IRAS-discovered debris disks, C.H. Chen, B.A. Sargent, C.J. Bohac, K.H. Kim, E. Leibensperger, M. Jura, J. Najita, W.J. Forrest, D.M. Watson, G.C. Sloan, and L.D. Keller, Astrophys. J. (Supplement) 166, 351 (2006).
A Fresh Look at Distributed vs Clustered Star Formation: Molecular Cloud Surveys with Spitzer, Gutermuth, Robert A.; Pipher, J. L.; Myers, P. C.; Megeath, S.; Allen, L. E.;Allen, T. American Astronomical Society Meeting 208, #8.07; Bulletin of the American Astronomical Society, Vol. 38, p.87 Publication Date: 06/2006 2006AAS...208.0807G
Silica in Protoplanetary Disks, Sargent, Benjamin A.; Forrest, W. J.; Watson, D. M.;McClure, M. K.; Bohac, C. J.; Furlan, E.; Kim, K. H.; Green, J. D.; Sloan, G. C. 2007 AAS/AAPT Joint Meeting, American Astronomical Society Meeting 209, #10.06; Bulletin of the American Astronomical Society, Vol. 38, p.911Publication Date: 12/2006 2006AAS...209.1006S
Infrared Extinction toward Nearby Star-forming Regions, Flaherty, K. M.; Pipher, J. L.; Megeath, S. T.; Winston, E. M.; Gutermuth, R. A.; Muzerolle, J.; Allen, L. E.; Fazio, G. G The Astrophysical Journal, Volume 663, Issue 2, pp. 1069-1082. Publication Date: 07/20070.1086/518411 2007ApJ...663.1069F
Spitzer Space Telescope observations of the magnetic cataclysmic variable AE Aqr, Guillaume Dubus, Ronald E. Taam, Chat Hull, Dan M. Watson, and Jon C. Mauerhan, Astrophys. J., 663, 516 (2007).
Silicate dust in evolved protoplanetary disks: growth, sedimentation, and accretion, Aurora Sicilia-Aguilar, Lee W. Hartmann, Dan Watson, Chris Bohac, Thomas Henning, and Jeroen Bouwman, Astrophys J. 659, 1637 (2007).
The unusual hydrocarbon emission from the early carbon star HD 100764: the connection between aromatics and aliphatics, G.C. Sloan, M. Jura, W.W. Duley, K.E. Kraemer, J. Bernard-Salas, W.J. Forrest, B. Sargent, A. Li, D.J. Barry, C.J. Bohac, D.M. Watson, and J.R. Houck, Astrophys. J. 664, 1144 (2007).
The dust and gas around beta Pictoris, C.H. Chen, A. Li, C. Bohac, K.H. Kim, D.M. Watson, J.E. Van Cleve, J.R. Houck, K. Stapelfeldt, M.W. Werner, G. Rieke, K. Su, D. Backman, C. Beichman, G. Fazio, L. Hartmann, and S.T. Megeath, Astrophys. J. 666, 466 (2007).
Hubble and Spitzer observations of an edge-on circumstellar disk around a brown dwarf, K.L. Luhman, Lucia Adame, Paola d’Alessio, Nuria Calvet, Kim K. McLeod, C.J. Bohac,William J. Forrest, Lee Hartmann, B. Sargent, and Dan M. Watson, Astrophys. J. 666, 1219 (2007).
Probing the dust and gas in the transitional disk around CS Cha with Spitzer, Catherine Espaillat, Nuria Calvet, Paola D^?Alessio, Edwin
Bergin, Lee Hartmann, Dan Watson, Elise Furlan, Joan Najita, William Forrest, Melissa McClure, Ben Sargent, Chris Bohac, and Samuel T.
Harrold, Astrophys. J. (Letters) 664, 111 (2007). 007ApJ...664L.111E
The development of a protostellar disk from its natal envelope, Dan M. Watson, C.J. Bohac, C. Hull, William J. Forrest, E. Furlan, J. Najita, Nuria Calvet, Paola dAlessio, Lee Hartmann, B. Sargent, Joel D. Green, Kyoung Hee Kim*, and J.R. Houck, Nature 448, 1026 (2007).\
"Planetary embryos and planetesimals residing in thin debris discs", Quillen, AC; Morbidelli, A; Moore, A, MONTHLY NOTICES OF THE ROYAL ASTRONOMICAL SOCIETY, p. 1642, vol. 380, (2007). Published, 10.1111/j.1365-2966.2007.12217.
Hosseinbor, AP; Edgar, RG; Quillen, AC; LaPage, A, "The formation of an eccentric gap in a gas disc by a planet in an eccentric orbit", MONTHLY NOTICES OF THE ROYAL ASTRONOMICAL SOCIETY, p. 966, vol. 378, (2007). 10.1111/j.1365-2966.2007.11832.x , 2007MNRAS.378..966H ,
Tremblay, GR; Chiaberge, M; Donzelli, CJ; Quillen, AC; Capetti, A; Sparks, WB; Macchetto, FD, "Isophotal structure and dust distribution in radio-loud elliptical galaxies", ASTROPHYSICAL JOURNAL, p. 109, vol. 666, (2007). Published,
Faber, P; Quillen, AC, "The total number of giant planets in debris discs with central clearings", MONTHLY NOTICES OF THE ROYAL ASTRONOMICAL SOCIETY, p. 1823, vol. 382, (2007). Published, 10.1111/j.1365-2966.2007.12490.
Disk Evolution In The Three Nearby Star-forming Regions Of Taurus, Chamaeleon And Ophiuchus, Furlan, Elise; Watson, D. M.; McClure, M.; Kim, K.; Forrest, W. J.; Sargent, B.; Calvet, N.; D'Alessio, P.; Hartmann, L. American Astronomical Society, AAS Meeting #211, #50.06 Publication Date: 12/2007 007AAS...211.5006F
2008ApJS..176..184F , Spitzer IRS Spectra and Envelope Models of Class I Protostars in Taurus, Furlan, E.; McClure, M.; Calvet, N.; Hartmann, L.; D'Alessio, P.; Forrest, W. J.;Watson, D. M.; Uchida, K. I.; Sargent, B.; Green, J. D.; Herter, T. L. The Astrophysical Journal Supplement Series, Volume 176, Issue 1, pp. 184-215 ( 2007arXiv0711.4038F)
Quillen, AC; Bland-Hawthorn, J; Green, JD; Smith, JD; Prasad, DA; Alonso-Herrero, A; Cleary, K; Brookes, MH; Lawrence, CR, "Spitzer Space Telescope Infrared Spectrograph mapping of the central kpc of Centaurus A", MONTHLY NOTICES OF THE ROYAL ASTRONOMICAL SOCIETY, p. 1469, vol. 384, (2008). Published, 10.1111/j.1365-2966.2007.12768.
Crystalline silicates and dust processing in the protoplanetary disks of the Taurus young cluster, Dan M. Watson, Jarron M. Leisenring, Elise Furlan, C.J. Bohac, B. Sargent, W.J. Forrest, Nuria Calvet, Lee Hartmann, Jason Nordhaus, Joel D. Green, K.H. Kim, G.C. Sloan, C.H. .Chen, L.D. Keller, Paola dAlessio, J. Najita, Keven I. Uchida, and J.R. Houck, Astrophys. J. (Supplement), in press (2008).
2008AAS...212.0903M, Manoj, P.; Sargent, B. A.; Furlan, E.; McClure, M. K.; Kim, K. H.; Luhman, K. L.; Watson, D. M.; Forrest, W. J., A Comparative Study of Crystalline Silicates and Dust Processing in the Protoplanetary Disks of Taurus, Chamaeleon and Ophiuchus Young Clusters, American Astronomical Society, AAS Meeting #212, #9.03; Bulletin of the American Astronomical Society, Vol. 40, p.200
Spitzer-IRS observations of Class I/II Sources in Taurus: composition, temperature and thermal history of the ices, G. Zasowski, F. Markwick-Kemper, Dan M. Watson, Joel D. Green, E. Furlan, C.J. Bohac, and C. Hull, Astrophys. J., in press (2008).
2008ApJ...683L.187M McClure, M. K.; Forrest, W. J.; Sargent, B. A.; Watson, Dan M.; Furlan, E.; Manoj, P.; Luhman, K. L.; Calvet, N.; Espaillat, C.; D'Alessio, P.; and 3 coauthors, A Sub-AU Outwardly Truncated Accretion Disk around a Classical T Tauri Star, ASTROPHYSICAL JOURNAL LETTERS Volume: 683 Issue: 2 Pages: L187-L190 DOI:10.1086/591666 Published: AUG 20 2008 2008arXiv0801.0402M
"2008ApJS..176...39Q Quillen, Alice C.; Zufelt, Nicholas; Park, Jaehong; O'Dea, Christopher P.; Baum, Stefi A.; Privon, George; Noel-Storr, Jacob; Edge, Alastair; Russell, Helen; Fabian, Andy; and 4 coauthors An Infrared Survey of Brightest Cluster Galaxies. I.; The Astrophysical Journal Supplement Series, Volume 176, Issue 1, pp. 39-58.
2008ApJ...681.1035O O'Dea, Christopher P.; Baum, Stefi A.; Privon, George; Noel-Storr, Jacob; Quillen, Alice C.; Zufelt, Nicholas; Park, Jaehong; Edge, Alastair; Russell, Helen; Fabian, Andrew C.; and 5 coauthors; An Infrared Survey of Brightest Cluster Galaxies. II. Why are Some Brightest Cluster Galaxies Forming Stars?; The Astrophysical Journal, Volume 681, Issue 2, pp. 1035-1045
2008IAUS..245..185O O'Dea, Christopher P.; Quillen, Alice; Zufelt, Nicholas; Park, Jaehong; Edge, Alastair; Russell, Helen; Fabian, Andy; Baum, Stefi
Why are some brightest cluster galaxies forming stars?; Formation and Evolution of Galaxy Bulges, Proceedings of the International Astronomical Union, IAU Symposium, Volume 245, p. 185-188
Spitzer, Near-Infrared, and Submillimeter Imaging of the Relatively Sparse Young Cluster, Lynds 988e, Allen, Thomas S.; Pipher, Judith L.; Gutermuth, Robert A.; Megeath, S. Thomas; Adams, Joseph D.; Herter, Terry L.; Williams, Jonathan P.; Goetz-Bixby, Jennifer A.; Allen, Lori E.; Myers, Philip C., The Astrophysical Journal, Volume 675, Issue 1, pp. 491-506. (ApJ Homepage) Publication Date: 03/20082008ApJ...675..491A
Spitzer-IRS observations of disks around brown dwarfs in the TW Hydrae association, A.L. Morrow, K.L. Luhman, C. Espaillat, P. d’Alessio, L. Adame, N. Calvet, W.J. Forrest, B. Sargent, L. Hartmann, D.M. Watson and C.J. Bohac, Astrophys. J. (Letters), in press (2008).
Spitzer-IRS spectra and envelope models of Class I protostars in Taurus, E. Furlan, M. McClure, N. Calvet, L. Hartmann, P. d’Alessio, W. J. Forrest, D.M. Watson, K. I. Uchida, B. Sargent, J. D. Green and T. L. Herter, Astrophys. J. (Supplement), in press (2008). 2007arXiv0711.4038F
2008arXiv0808.1841B Bagley, Micaela; Minchev, Ivan; Quillen, Alice C, The Morphology of Collisionless Galactic Rings Exterior to Evolving Bars
2008ApJ...683L.187M McClure, M. K.; Forrest, W. J.; Sargent, B. A.; Watson, Dan M.; Furlan, E.; Manoj, P.; Luhman, K. L.; Calvet, N.; Espaillat, C.; D'Alessio, P.; and 3 coauthorsA Sub-AU Outwardly Truncated Accretion Disk around a Classical T Tauri Star, The Astrophysical Journal, Volume 683, Issue 2, pp. L187-L190, AUG 20 2008
2008DPS....40.5809M Moore, Alexander John; Quillen, A. Planet Migration Through a Self-Gravitating Planetesimal Disk; American Astronomical Society, DPS meeting #40, #58.09; Bulletin of the American Astronomical Society, Vol. 40, p.504,2008arXiv0809.2855M Moore, Alexander J.; Quillen, Alice C.; Edgar, Richard G. Planet Migration through a Self-Gravitating Planetesimal Disk
2008DPS....40.1105Q Quillen, Alice C.; Moore, A.; Aggressively Parallel Algorithms of Collision and Nearest Neighbor Detection for GPU Planetesimal Disk Simulation; American Astronomical Society, DPS meeting #40, #11.05; Bulletin of the American Astronomical Society, Vol. 40, p.402
2009ApJS..182..477S Sargent, B. A.; Forrest, W. J.; Tayrien, C.; McClure, M. K.; Watson, Dan M.; Sloan, G. C.; Li, A.; Manoj, P.; Bohac, C. J.; Furlan, E.; and 2 coauthorsDust Processing and Grain Growth in Protoplanetary Disks in the Taurus-Auriga Star-Forming Region ASTROPHYSICAL JOURNAL SUPPLEMENT SERIES Volume: 182 Issue: 2 Pages: 477-508 DOI: 10.1088/0067-0049/182/2/477 Published: JUN 2009
C.M. Lisse, C.H. Chen, M.C. Wyatt, A. Morlok, I. Song, G. Bryden and P. Sheehan, "Abundant Circumstellar Silica Dust and SiO Gas Created by a Giant Hypervelocity Collision in the ~12 Myr HD172555 System", Astrophys. J, p. 2019, vol. 701, (2009).
2009ApJ...690.1193S Sargent, B. A.; Forrest, W. J.; Tayrien, C.; McClure, M. K.; Li, A.; Basu, A. R.; Manoj, P.; Watson, D. M.; Bohac, C. J.; Furlan, E.; and 3 coauthors Silica in Protoplanetary Disks, ASTROPHYSICAL JOURNAL Volume: 690 Issue: 2 Pages: 1193-1207 DOI: 10.1088/0004-637X/690/2/1193 Published: JAN 10 2009
2009MNRAS.395..537B Bagley, Micaela; Minchev, Ivan; Quillen, Alice C. The morphology of galactic rings exterior to evolving bars: test-particle simulations , Monthly Notices of the Royal Astronomical Society, Volume 395, Issue 1, pp. 537-553
2009yCat..21760039Q Quillen, A. C.; Zufelt, N.; Park, J.; O'Dea, C. P.; Baum, S. A.; Privon, G.; Noel-Storr, J.; Edge, A.; Russell, H.; Fabian, A.; and 4 coauthors IR survey of brightest cluster galaxies I. (Quillen+, 2008); VizieR On-line Data Catalog: J/ApJS/176/39. Originally published in: 2008ApJS..176...39Q
Patrick Sheehan, Dan M. Watson, Manoj Puravankara, and Joan R. Najita, "Asteroid-belt analogs among IRAS-discovered debris disks", Astrophys. J, p. 1367, vol. 701, (2009)
2009AIPC.1201..182O O'Dea, Christopher P.; Quillen, Alice; Park, Jaehong; Zufelt, Nicholas; Baum, Stefi A.; Privon, George; Noel-Storr, Jacob; Edge, Alastair; Russell, Helen; Fabian, Andy; and 5 coauthors; Spitzer Observations of Star Formation in Brightest Cluster Galaxies; THE MONSTER'S FIERY BREATH: FEEDBACK IN GALAXIES, GROUPS, AND CLUSTERS. AIP Conference Proceedings, Volume 1201, pp. 182-185 (2009).
2009ApJ...700.1017K Kim, K. H.; Watson, Dan M.; Manoj, P.; Furlan, E.; Najita, J.; Forrest, W. J.; Sargent, B.; Espaillat, C.; Calvet, N.; Luhman, K. L.; and 3 coauthors Mid-Infrared Spectra of Transitional Disks in the Chamaeleon I Cloud, The Astrophysical Journal, Volume 700, Issue 2, pp. 1017-1025 (2009).
2009ApJ...701.1367C Chen, Christine H.; Sheehan, Patrick; Watson, Dan M.; Manoj, P.; Najita, Joan R., Solar System Analogs Around IRAS-Discovered Debris Disks, The Astrophysical Journal, Volume 701, Issue 2, pp. 1367-1372 (2009).
2009MNRAS.396.1783P Pettibone, Ryan; Blackman, Eric G. Stochastic wobble of accretion discs and jets from turbulent rocket torques; Monthly Notices of the Royal Astronomical Society, Volume 396, Issue 3, pp. 1783-1788
2010AAS...21542301S Slipski, Marek; Mamajek, E. E. , Improved Ages Estimates for Extrasolar Planet Host Stars, American Astronomical Society, AAS Meeting #215, #423.01; Bulletin of the American Astronomical Society, Vol. 42, p.326, 1/2010.
2010AAS...21542810L Lacy, John H.; Watson, D. M.; Harrold, S. T.
Non-LTE Modeling of Infrared Molecular Line Emission From Protoplanetary Disks: Evidence for Dust Settling, American Astronomical Society, AAS Meeting #215, #428.10; Bulletin of the American Astronomical Society, Vol. 42, p.346
2010AAS...21534503M, McClure, Melissa; Furlan, E.; Manoj, P.; Luhman, K.; Watson, D. M.; Forrest, W.; Espaillat, C.; Calvet, N.; D'Alessio, P.; Sargent, B.; and 2 coauthors, Proto-planetary Disks At < 1 Myr: The Evolutionary State Of Ophiuchus, American Astronomical Society, AAS Meeting #215, #345.03; Bulletin of the American Astronomical Society, Vol. 42, p.451
010AAS...21631502K, Kim, Kyoung Hee; Watson, D. M.; Manoj, P.; Forrest, W. J.; Najita, J.; Furlan, E.; Calvet, N.; Muzerolle, J.; Megeath, T.; Espaillat, C.; McClure, M., A Clue to the Formation of Transitional Disks: Mass Accretion Rates, American Astronomical Society, AAS Meeting #216, #315.02; Bulletin of the American Astronomical Society, Vol. 41, p.894
2010ApJS..188...75M McClure, M. K.; Furlan, E.; Manoj, P.; Luhman, K. L.; Watson, D. M.; Forrest, W. J.; Espaillat, C.; Calvet, N.; D'Alessio, P.; Sargent, B.; and 2 coauthors, The Evolutionary State of the Pre-main Sequence Population in Ophiuchus: A Large Infrared Spectrograph Survey, The Astrophysical Journal Supplement, Volume 188, Issue 1, pp. 75-122 (2010).
2010ApJ...719.1619O O'Dea, Kieran P.; Quillen, Alice C.; O'Dea, Christopher P.; Tremblay, Grant R.; Snios, Bradford T.; Baum, Stefi A.; Christiansen, Kevin; Noel-Storr, Jacob; Edge, Alastair C.; Donahue, Megan; Voit, G. Mark, Hubble Space Telescope Far-ultraviolet Observations of Brightest Cluster Galaxies: The Role of Star Formation in Cooling Flows and BCG Evolution, The Astrophysical Journal, Volume 719, Issue 2, pp. 1619-1632 (2010).
2010AAS...21543627O O'Dea, Kieran; Quillen, A.; Snios, B.; O'Dea, C.; Tremblay, G.; Baum, S.; Edge, A.; Donahue, M.; Voit, M. HST Ultraviolet Observations of Star Formation in Seven Brightest Cluster Galaxies in Cooling Flows, American Astronomical Society, AAS Meeting #215, #436.27; Bulletin of the American Astronomical Society, Vol. 42, p.388
O'Dea, Kieran P, Quillen, Alice C, O'Dea, Christopher P, Tremplay, Grant G, Snios,Bradford T, Baum,Stefi A, Christiansen, Kevin,NoelStorr, Jacob, Edge, Alastair C, Donahue, Megan, Voit,G,, "Hubble Space Telescope Far-ultraviolet Observations of Brightest Cluster Galaxies: The Role of Star Formation in Cooling Flows and BCG Evolution", Astrophysical Journal, p. 1619, vol. 719, (2010)
Marek Slipski and Eric E Mamajek, "Improved Age Estimates for Solar-Type Main Sequence Stars Harboring Exoplanets Usng Chromospheric Activity", Astrophysical Journal, p. , vol. , (2010). Submitted,
2011MNRAS.417..762Q Quillen, Alice C.; Dougherty, Jamie; Bagley, Micaela B.; Minchev, Ivan; Comparetta, Justin Structure in phase space associated with spiral and bar density waves in an N-body hybrid galactic disc , Monthly Notices of the Royal Astronomical Society, Volume 417, Issue 1, pp. 762-784
2011arXiv1107.3261A Arnold, L. A.; Watson, Dan M.; Kim, K. H.; Manoj, P.; Remming, I.; Sheehan, P.; Adame, L.; Forrest, W.; Furlan, E.; Mamajek, E.; and 4 coauthors A Spitzer IRS Survey of NGC 1333: Insights into disk evolution from a very young cluster
2011ApJS..193...11M Manoj, P.; Kim, K. H.; Furlan, E.; McClure, M. K.; Luhman, K. L.; Watson, Dan M.; Espaillat, C.; Calvet, N.; Najita, J. R.; D'Alessio, P.; and 6 coauthors Spitzer Infrared Spectrograph Survey of Young Stars in the Chamaeleon I Star-Forming Region, The Astrophysical Journal Supplement, Volume 193, Issue 1, article id. 11 (2011)
2011arXiv1110.4172L Lisse, C. M.; Wyatt, M. C.; Chen, C. H.; Morlok, A.; Watson, D. M.; Manoj, P.; Sheehan, P.; Currie, T. M.; Thebault, P.; Sitko, M. L. Spitzer Evidence for a Late Heavy Bombardment and the Formation of Urelites in {eta} Corvi at ~1 Gyr, accepted for publication in the Astrophysical Journal 01 Dec 2011
2011LPI....42.2438L Lisse, C. M.; Chen, C. H.; Wyatt, M. C.; Morlok, A.; Thebault, P.; Bryden, G.; Watson, D. M.; Manoj, P.; Sheehan, P.; Sloan, G.; Currie, T. M. Spitzer Observations of η Corvi: Evidence at ~1 Gyr for an LHB-Like Delivery of Organics and Water-Rich Material to the THZ of a Sun-Like Star, 42nd Lunar and Planetary Science Conference, held March 7–11, 2011 at The Woodlands, Texas. LPI Contribution No. 1608, p.2438
2011ApJ...733L..32P Poteet, Charles A.; Megeath, S. Thomas; Watson, Dan M.; Calvet, Nuria; Remming, Ian S.; McClure, Melissa K.; Sargent, Benjamin A.; Fischer, William J.; Furlan, Elise; Allen, Lori E.; and 5 coauthors, The Astrophysical Journal Letters, Volume 733, Issue 2, article id. L32 (2011)
2011NewA...16..445M Moore, Alexander; Quillen, Alice C.; QYMSYM: A GPU-accelerated hybrid symplectic integrator that permits close encounters; QYMSYM: A GPU-accelerated hybrid symplectic integrator that permits close encounters, New Astronomy, Volume 16, Issue 7, p. 445-455
2011arXiv1112.0577Q Quillen, Alice C.; Hasan, Imran; Moore, Alexander, Capture of Irregular Satellites via Binary Planetesimal Exchange Reactions in Migrating Planetary Systems
2011ApJ...733L..32P Poteet, Charles A.; Megeath, S. Thomas; Watson, Dan M.; Calvet, Nuria; Remming, Ian S.; McClure, Melissa K.; Sargent, Benjamin A.; Fischer, William J.; Furlan, Elise; Allen, Lori E.; and 5 coauthors A Spitzer Infrared Spectrograph Detection of Crystalline Silicates in a Protostellar Envelope, The Astrophysical Journal Letters, Volume 733, Issue 2, article id. L32 (2011)
2011ApJ...726L...3A, Adame, Lucía; Calvet, Nuria; Luhman, K. L.; D'Alessio, Paola; Furlan, Elise; McClure, M. K.; Hartmann, Lee; Forrest, William J.; Watson, Dan M., Spitzer Spectroscopy of the Circumprimary Disk in the Binary Brown Dwarf 2MASS J04414489+2301513, The Astrophysical Journal Letters, Volume 726, Issue 1, article id. L3 (2011)
2011ApJS..195....3F, Furlan, E.; Luhman, K. L.; Espaillat, C.; D'Alessio, P.; Adame, L.; Manoj, P.; Kim, K. H.; Watson, Dan M.; Forrest, W. J.; McClure, M. K.; and 4 coauthors, The Spitzer Infrared Spectrograph Survey of T Tauri Stars in Taurus, The Astrophysical Journal Supplement, Volume 195, Issue 1, article id. 3 (2011)
2011arXiv1107.3261A Arnold, L. A.; Watson, Dan M.; Kim, K. H.; Manoj, P.; Remming, I.; Sheehan, P.; Adame, L.; Forrest, W.; Furlan, E.; Mamajek, E.; and 4 coauthors A Spitzer IRS Survey of NGC 1333: Insights into disk evolution from a very young cluster
E.J. Bubar, M.J. Pecaut, E.E. Mamajek, M. Bourque and M.R. Meyer, "Spectroscopic and Photometric Parameter Effects in Young Stars: Sco-Cen", Astrophysical J., p. , vol. , (2011). in preparation
E.E. Mamajek and J. Gruszko, "A Complied Catalogue of Ca II H & K Chromospheric Activity Measurements for FGK-type HD and HIP stars", Astrophysical J., p. , vol. , (2011). in preparation

Theoretical Astrophysics (publications with undergarduates) Journal articles and Conference Proceedings 1994-2008

Origin and Evolution of the Egg Nebula, Delamarter, G.; Frank, A.; Vieira, M.; Wood, K.; Welch, C. American Astronomical Society, 195th AAS Meeting, #110.09; Bulletin of the American Astronomical Society, Vol. 31, p.1537 Publication Date: 12/1999
S. A. Hartnoll and E. G. Blackman, "Reprocessed Emission Line Profiles from Dense Clouds in Geometrically Thick Accretion Engines", Monthly Notices of the Royal Astronomical Society, vol. 324, (2001), p. 257.
Hartnoll, S.~A.~\& Blackman, E.~G.\2002, Monthly Notices of the Royal Astronomical Society, 332, L1 Iron line profiles from black hole accretion discs with spiral velocity structure
Frank, A.; Cunningham, A.; Powers, A.; Poludnenko, A. “2002, AAS, 201, 9301”Hypersonic Swizzle Sticks: Interacting YSO Jets”
"Understanding the saturation of proton-driven Weibel instabilities and implications for astrophysics", √PHYSICS OF PLASMAS, p. , vol. 14, (2007). Published,10.1063/1.2409606. 2007PhPl...14a2901R
Efficiency of proton-driven Weibel instability at thermalizing initially two-temperature astrophysical plasmas, Ren, Chuang; Blackman, Eric; Fong, Wen-Fai, American Physical Society, 48th Annual Meeting of the Division of Plasma Physics, October 30-November 3, 2006, abstract #GP1.082 2006APS..DPPGP1082R
"Empirical relation between angular momentum transport and thermal-to-magnetic pressure ratio in shearing box simulations", Blackman, EG; Penna, RF; Varniere, P,NEW ASTRONOMY, p. 244, vol. 13, (2008). 2006astro.ph..7119B 10.1016/j.newast.2007.10.004 , 2008NewA...13..244B

Geophysics (publications with undergarduates) Journal articles and Conference Proceedings 1994-2008

A Late Cretaceous Reversal Recorded in Lavas of the High Canadian Arctic Sinnett, D. K.;Tarduno, J. A.; Cottrell, R. D. American Geophysical Union, Fall Meeting 2004, abstract #GP11D-0873
Publication Date: 12/2004 2004AGUFMGP11D0873S
Preliminary Paleomagnetic Results From Late Cretaceous Volcanic Rocks of Northern Ellesmere Island, Canada, Sinnett, D.; Tarduno, J. A.; Cottrell, R. American Geophysical Union, Spring Meeting 2004, abstract #GP31B-02 Publication Date: 05/2004 2004AGUSMGP31B..02S
Toward Defining Archean Plate Motion, Bauch, D.G, Tarduno, J A, Cottrell, R D, Watkeys, M K,(American Geophysical Union, AGU), Eos Trans. AGU, 85(47), Fall Meet. Suppl., U33A-0031, 2004. 2004AGUFM.U33A0031B
Preliminary Directional and Paleointensity Studies of South African Proterozoic/Archean Minerals using a CO2 Laser System, Bauch, D.G., Cottrell, R.D.,and Tarduno, J.A. (American Geophysical Union, AGU), Eos, Transactions of the American Geophysical Union, 85(17) Jt. Assem. Suppl., GP43A-05, 2004. 004AGUSMGP43A..05B
Geomagnetic Field Morphology and Inner Core Growth,Tarduno, J. A.; Cottrell, R. D.;Bauch, D.G.; Watkeys, M. K., (European geophysical Union, EGU), Geophysical Research Abstracts, Vol. 7, SRef-ID: 1607-7962/gra/EGU05-A-02715, 2005.
Mid-Archean Plate Velocities, (European geophysical Union, EGU), Tarduno, J. A.; Bauch, D.G.; Cottrell, R. D.; Watkeys, M. K.,Geophysical Research Abstracts, Vol. 7, SRef-ID: 1607-7962/gra/EGU05-A-02719, 2005.
Paleomagnetic characterization of Mesozoic dikes from Mauritania, Africa, Mason, S.N., Cottrell, R.D., Tarduno, J.A., Lo, K.(American Geophysical Union, AGU), Eos Trans. AGU, 87 (52), Fall Meeting Suppl., Abstract GP11A-00, 2006. 2006AGUFMGP11A0066M
Characterization of Titanomagnetites and Titanomaghemites From Lavas of the Southern Volcanics, Chatham Islands, New Zealand, Brown, H.; Mason, S.; Ebsary, W.; Bauch, D.; Cottrell, R. D.; Tarduno, J. A.; Sutherland, R.; Campbell, H. American Geophysical Union, Fall Meeting 2005, abstract #GP13A-0029 Publication Date: 12/20052005AGUFMGP13A0029B
Temperature Dependence of Magnetic Susceptibility as a Potential indicator of fine-scale oxyexsolution in igneous rocks, Smirnov, A V, Bauch, D.G. and Tarduno, J A,(American Geophysical Union, AGU), Eos Trans. AGU, 86(52), Fall Meet. Suppl., GP13A-0040, 2005. 2005AGUFMGP13A0040S
Defining the Magnetic Field of the Early Earth Through Rock Magnetic and Paleomagnetic Analyses of Single Silicate Crystals, Bauch, D. G.; Tarduno, J. A.; Cottrell, R. D.; Watkeys, M. K American Geophysical Union, Fall Meeting 2005, abstract #GP13A-0032 Publication Date: 12/2005 2005AGUFMGP13A0032B
New approaches for the determination of absolute paleointensity: long and short-term trends, Tarduno, J.A., Cottrell, R.D., Morris, K, Watkeys, M.K., (American Geophysical Union, AGU), Eos Trans. AGU, 87 (52), Fall Meeting Suppl., Abstract GP13A-01, 2006. 2006AGUFMGP13A..01T
Preliminary paleointensity investigation of Iron Age pottery shards from southern Africa,Wendt, A. K.; Tarduno, J. A.; Cottrell, R. D.; Watkeys, M. K.; Huffman, T. N American Geophysical Union, Fall Meeting 2007, abstract #GP41A-03 Publication Date: 12/20072007AGUFMGP41A..03W
Geomagnetic field strength 3.2 billion years ago recorded by single silicate crystals,Tarduno, J.A., R.D. Cottrell, M.K. Watkeys and D. Bauch, Nature, 446, 657-660, 2007.
The paleointensity of single silicate crystals from the Southern Volcanics of the Chatham Islands: What is the behavior of Earth's magnetic field leaving a superchron state?, Sail, A.B., Tarduno, J.T., Cottrell, R.D., Sutherland, R. and Campbell, H.,(American Geophysical Union, AGU) Eos Trans. AGU, 88(52), Fall Meet., Suppl., GP42A-07, 2007.2007AGUFMGP42A..07S
2009AGUFMGP33B..07T Tarduno, J. A.; Cottrell, R. D.; Watkeys, M. K.; Hofmann, A.; Doubrovine, P. V.; Nelson, J.; Usui, Y., Paleointensity, solar wind and magnetopause 3.45 billion years ago (Invited) American Geophysical Union, Fall Meeting 2009, abstract #GP33B-07
J.A.Tarduno, R.D. Cottrell, J. Hopkins, A.M. Erickson, "The paleomagnetic record of pallasite meteorites", Eos. Trans. AGU Fall Meeting Supplement, p. GP34A-05, vol. 90(52), (2009).
A.M. Erickson, J.A. Tarduno, R.D. Cottrell, "Magnetic properties of the Esquel Pallasite", Eos Trans. AGU Fall Meeting Supplement, p.
GP41B-082, vol. 90(52), (2009). Published,
2010LPI....41.2150T Tarduno, J. A.; Cottrell, R. D.; Hopkins, J.; Erickson, A., The Paleomagnetic Record of Pallasite Meteorites, 41st Lunar and Planetary Science Conference, held March 1-5, 2010 in The Woodlands, Texas. LPI Contribution No. 1533, p.215
Scribner, C.A., Neukirch,L.P., Tarduno, J.A., Watkeys, M.K., Huffman, T., "Archaeimagnetic analyses of iron age burnt hut floors from southern Africa", Eos. Trans. AGU, p. GP11A-074, vol. 91, (2010).

Other (Physics Education, Climate Studies) publications with undergarduates Journal articles Conference Proceedings 1994-2008

A Study of an Acrylic Cerenkov Radiation Detector, by B. Porter, P. Auchincloss, P. deBarbaro, A. Bodek, and H. Budd. American Journal of Physics 67, 1022, November 1999.
Research Summer Experience at Fermilab, Jon Insler, Published in The Academy (Wilbraham And Monson Academy) Spring 2002 Issue. http://WMAcademy.org/Pages/TheAcad.html
Climate sensitivity of the Earth to solar irradiance, Douglass DH, Clader BD GEOPHYSICAL RESEARCH LETTERS Volume: 29 Issue: 16 Article Number: 1786 Published: AUG 23 2002
D. H. Douglass, D. R. Abrams, D. M. Baranson, and B. D. Clader, "On the nature of the El Niño/La Niña events" http://arXiv.org/abs/physics/0203016 (2002)
L. E. Schmidt, H. L. Helfer, and R. S. Knox, “Development of an elementary climate model: two-layer cellular case” http://arXiv.org/abs/physics/0308061 (2003)
Test for harmful collinearity among predictor variables used in modeling global temperature, Douglass DH, Clader BD, Christy JR, et al., CLIMATE RESEARCH Volume: 24 Issue: 1 Pages: 15-18 Published: JUN 10 2003
Altitude dependence of atmospheric temperature trends: Climate models versus observation, Douglass DH, Pearson BD, Singer SF, GEOPHYSICAL RESEARCH LETTERS Volume: 31 Issue: 13 Article Number: L13208 Published: JUL 9 2004
Disparity of tropospheric and surface temperature trends: New evidence; D. H. Douglass, B. D. Pearson, S. F. Singer, P. C. Knappenberger, and P. J. Michaels GEOPHYSICAL RESEARCH LETTERS Volume: 31 Issue: 13 Article Number: L13207 Published: JUL 9 2004
Iceland as a heat island; Douglass DH, Patel V, Knox RS; GEOPHYSICAL RESEARCH LETTERS Volume: 32 Issue: 3 Article Number: L03709 Published: FEB 12 2005
Reply to comments by H. Bjornsson et al. on "Iceland as a heat island'' Douglass DH, Patel V, Knox RS; GEOPHYSICAL RESEARCH LETTERS Volume: 32 Issue: 24 Article Number: L24715 Published: DEC 28 2005
Thermocline flux exchange during the Pinatubo event, Douglass DH, Knox RS, Pearson BD, et al. GEOPHYSICAL RESEARCH LETTERS Volume: 33 Issue: 19 Article Number: L19711 Published: OCT 13 2006
A comparison of tropical temperature trends with model predictions, David H. Douglass, John R. Christy, Benjamin D. Pearson, S. Fred Singer published, Int. J. Climato. 10.1002/joc.1651 OCT 2007
2008arXiv0812.0573K Knox, Robert S.; LaTourette, Kevin J.; Application of a dynamical two-box surface-atmosphere model to the Mount Pinatubo cooling event

LIGO Publications with REU Undergraduates

2011arXiv1109.1809A Abbott, B. P.; Abbott, R.; Abernathy, M.; Accadia, T.; Acernese, F.; Adams, C.; Adhikari, R.; Ajith, P.; Allen, B.; Allen, G. S.; and 704 coauthorsDirectional limits on persistent gravitational waves using LIGO S5 science data
2011PhRvD..83l2005A Abadie, J.; Abbott, B. P.; Abbott, R.; Abernathy, M.; Accadia, T.; Acernese, F.; Adams, C.; Adhikari, R.; Ajith, P.; Allen, B.; and 714 coauthorsSearch for gravitational waves from binary black hole inspiral, merger, and ringdown
2011PhRvD..83f9902A Abadie, J.; Abbott, B. P.; Abbott, R.; Adhikari, R.; Ajith, P.; Allen, B.; Allen, G.; Amador Ceron, E.; Amin, R. S.; Anderson, S. B.; and 491 coauthorsPublisher's Note: Search for gravitational waves associated with the August 2006 timing glitch of the Vela pulsar [Phys. Rev. D 83, 042001 (2011)]
2011PhRvD..83d2001A Abadie, J.; Abbott, B. P.; Abbott, R.; Adhikari, R.; Ajith, P.; Allen, B.; Allen, G.; Amador Ceron, E.; Amin, R. S.; Anderson, S. B.; and 491 coauthorsSearch for gravitational waves associated with the August 2006 timing glitch of the Vela pulsar
2010NIMPA.624..223A Abadie, J.; Abbott, B. P.; Abbott, R.; Abernathy, M.; Adams, C.; Adhikari, R.; Ajith, P.; Allen, B.; Allen, G.; Amador Ceron, E.; and 535 coauthors Calibration of the LIGO gravitational wave detectors in the fifth science run
2010PhRvD..82j2001A Abadie, J.; Abbott, B. P.; Abbott, R.; Abernathy, M.; Accadia, T.; Acernese, F.; Adams, C.; Adhikari, R.; Ajith, P.; Allen, B.; and 702 coauthorsSearch for gravitational waves from compact binary coalescence in LIGO and Virgo data from S5 and VSR1
2010ApJ...722.1504A Abadie, J.; Abbott, B. P.; Abbott, R.; Abernathy, M.; Adams, C.; Adhikari, R.; Ajith, P.; Allen, B.; Allen, G.; Amador Ceron, E.; and 530 coauthors First Search for Gravitational Waves from the Youngest Known Neutron Star
2010CQGra..27q3001A Abadie, J.; Abbott, B. P.; Abbott, R.; Abernathy, M.; Accadia, T.; Acernese, F.; Adams, C.; Adhikari, R.; Ajith, P.; Allen, B.; and 702 coauthors TOPICAL REVIEW: Predictions for the rates of compact binary coalescences observable by ground-based gravitational-wave detectors
2010ApJ...715.1453A Abadie, J.; Abbott, B. P.; Abbott, R.; Accadia, T.; Acernese, F.; Adhikari, R.; Ajith, P.; Allen, B.; Allen, G.; Amador Ceron, E.; and 658 coauthors Search for Gravitational-wave Inspiral Signals Associated with Short Gamma-ray Bursts During LIGO's Fifth and Virgo's First Science Run
2010ApJ...715.1438A Abbott, B. P.; Abbott, R.; Acernese, F.; Adhikari, R.; Ajith, P.; Allen, B.; Allen, G.; Alshourbagy, M.; Amin, R. S.; Anderson, S. B.; and 658 coauthorsSearch For Gravitational-wave Bursts Associated with Gamma-ray Bursts using Data from LIGO Science Run 5 and Virgo Science Run 1
2010PhRvD..81j2001A Abadie, J.; Abbott, B. P.; Abbott, R.; Accadia, T.; Acernese, F.; Adhikari, R.; Ajith, P.; Allen, B.; Allen, G.; Amador Ceron, E.; and 659 coauthors All-sky search for gravitational-wave bursts in the first joint LIGO-GEO-Virgo run
2010ApJ...713..671A Abbott, B. P.; Abbott, R.; Acernese, F.; Adhikari, R.; Ajith, P.; Allen, B.; Allen, G.; Alshourbagy, M.; Amin, R. S.; Anderson, S. B.; and 671 coauthorsSearches for Gravitational Waves from Known Pulsars with Science Run 5 LIGO Data
2010arXiv1003.2481T The LIGO Scientific Collaboration; the Virgo Collaboration: J. Abadie; Abbott, B. P.; Abbott, R.; Abernathy, M; Accadia, T.; Acernese, F.; Adams, C.; Adhikari, R.; Ajith, P.; and 699 coauthors
Sensitivity to Gravitational Waves from Compact Binary Coalescences Achieved during LIGO's Fifth and Virgo's First Science Run
2009PhRvD..80j2002A Abbott, B. P.; Abbott, R.; Adhikari, R.; Ajith, P.; Allen, B.; Allen, G.; Amin, R. S.; Anderson, S. B.; Anderson, W. G.; Arain, M. A.; and 494 coauthorsSearch for high frequency gravitational-wave bursts in the first calendar year of LIGO's fifth science run
2009PhRvD..80j2001A Abbott, B. P.; Abbott, R.; Adhikari, R.; Ajith, P.; Allen, B.; Allen, G.; Amin, R. S.; Anderson, S. B.; Anderson, W. G.; Arain, M. A.; and 492 coauthorsSearch for gravitational-wave bursts in the first year of the fifth LIGO science run
2009PhRvD..80f2002A Abbott, B. P.; Abbott, R.; Adhikari, R.; Ajith, P.; Allen, B.; Allen, G.; Amin, R. S.; Anderson, S. B.; Anderson, W. G.; Arain, M. A.; and 493 coauthorsFirst LIGO search for gravitational wave bursts from cosmic (super)strings
2009PhRvD..80f2001A Abbott, B. P.; Abbott, R.; Adhikari, R.; Ajith, P.; Allen, B.; Allen, G.; Amin, R. S.; Anderson, S. B.; Anderson, W. G.; Arain, M. A.; and 493 coauthorsSearch for gravitational wave ringdowns from perturbed black holes in LIGO S4 data
2009PhRvD..80d7101A Abbott, B. P.; Abbott, R.; Adhikari, R.; Ajith, P.; Allen, B.; Allen, G.; Amin, R. S.; Anderson, S. B.; Anderson, W. G.; Arain, M. A.; and 495 coauthorsSearch for gravitational waves from low mass compact binary coalescence in 186 days of LIGO's fifth science run
2009PhRvD..80d2003A Abbott, B. P.; Abbott, R.; Adhikari, R.; Ajith, P.; Allen, B.; Allen, G.; Amin, R. S.; Anderson, S. B.; Anderson, W. G.; Arain, M. A.; and 494 coauthorsEinstein@Home search for periodic gravitational waves in early S5 LIGO data
2009Natur.460..990A Abbott, B. P.; Abbott, R.; Acernese, F.; Adhikari, R.; Ajith, P.; Allen, B.; Allen, G.; Alshourbagy, M.; Amin, R. S.; Anderson, S. B.; and 646 coauthors An upper limit on the stochastic gravitational-wave background of cosmological origin
2009ApJ...701L..68A Abbott, B. P.; Abbott, R.; Adhikari, R.; Ajith, P.; Allen, B.; Allen, G.; Amin, R. S.; Anderson, S. B.; Anderson, W. G.; Arain, M. A.; and 494 coauthorsStacked Search for Gravitational Waves from the 2006 SGR 1900+14 Storm
2009RPPh...72g6901A Abbott, B. P.; Abbott, R.; Adhikari, R.; Ajith, P.; Allen, B.; Allen, G.; Amin, R. S.; Anderson, S. B.; Anderson, W. G.; Arain, M. A.; and 491 coauthorsLIGO: the Laser Interferometer Gravitational-Wave Observatory
2009PhRvD..79l2001A Abbott, B. P.; Abbott, R.; Adhikari, R.; Ajith, P.; Allen, B.; Allen, G.; Amin, R. S.; Anderson, S. B.; Anderson, W. G.; Arain, M. A.; and 496 coauthorsSearch for gravitational waves from low mass binary coalescences in the first year of LIGO's S5 data
2009PhRvL.102k1102A Abbott, B. P.; Abbott, R.; Adhikari, R.; Ajith, P.; Allen, B.; Allen, G.; Amin, R. S.; Anderson, S. B.; Anderson, W. G.; Arain, M. A.; and 456 coauthorsAll-Sky LIGO Search for Periodic Gravitational Waves in the Early Fifth-Science-Run Data